Read summary

Number of reads

Number of reads after applying read length and quality filters. Read counts will also reflect host depletion and unclassified reads (kraken2 approach) and unmapped reads (minimap2 approach). Percentages are calculated from reads after the filtering.

Note that in the minimap2 approach, there are two filters based on the mapping identity and coverage that can increase the number of unclassified sequences. This table shows the unmapped reads before both filters are applied.

index Reads Unclassified|Unmapped Unclassified|Unmapped (%)
GOO-4-DRS-S20 1.0 0.0 0.0
GOO-4-MGE-S21 33775.0 0.0 0.0
GRO-36-MGE-S13 41664.0 0.0 0.0
GRO-41-MGE-S7 54671.0 0.0 0.0
HAM-17-MGE-S5 11.0 0.0 0.0
IRI-16-MGE-S1 4.0 0.0 0.0
JAR-2-MGE-S4 7.0 0.0 0.0
JAR-3-MGE-S19 28015.0 0.0 0.0
KOR-58-MGE-S14 8.0 0.0 0.0
KUB-58-MGE-S11 4.0 0.0 0.0
LAM-2-DRS-S16 1.0 0.0 0.0
LAM-2-MGE-S17 2.0 0.0 0.0
MAR-37-MGE-S22 5.0 0.0 0.0

Lineages

Sunburst

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

This visualization can be useful to interactively explore the taxonomic composition of the sample. It shows hierarchical data: each layer represents a taxonomic rank. The color indicates the abundance of that taxon in comparison with the total number of reads. Zooming into an specific taxon is possible by clicking on it.

Taxonomy

Barplot of the 12 most abundant taxa at the phylum rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 12 most abundant taxa at the class rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 12 most abundant taxa at the order rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 12 most abundant taxa at the family rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 12 most abundant taxa at the genus rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Barplot of the 12 most abundant taxa at the species rank in all the samples. Any remaining taxa have been collapsed under the 'Other' category to facilitate the visualization. The y-axis indicates the relative abundance of each taxon in percentages for each sample.

Abundances

Abundance table for the phylum rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

phylum GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom tax
Actinomycetota 0 2 10 6 0 1 0 52 0 0 0 0 0 71 Bacteria Bacteria_none Bacteria;Bacteria_none;Actinomycetota
Bacillota 0 8860 3894 6415 7 3 5 23068 2 3 1 2 1 42261 Bacteria Bacteria_none Bacteria;Bacteria_none;Bacillota
Bacteroidota 0 6 1801 1151 4 0 2 3186 0 0 0 0 0 6150 Bacteria Bacteria_none Bacteria;Bacteria_none;Bacteroidota
Campylobacterota 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Bacteria;Bacteria_none;Campylobacterota
Fusobacteriota 0 14 0 0 0 0 0 1 0 0 0 0 0 15 Bacteria Bacteria_none Bacteria;Bacteria_none;Fusobacteriota
Pseudomonadota 1 24611 35391 46575 0 0 0 1448 6 1 0 0 4 108037 Bacteria Bacteria_none Bacteria;Bacteria_none;Pseudomonadota
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unclassified;Unknown;Unknown

Abundance table for the class rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

class GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum tax
Actinomycetes 0 2 0 0 0 0 0 2 0 0 0 0 0 4 Bacteria Bacteria_none Actinomycetota Bacteria;Bacteria_none;Actinomycetota;Actinomycetes
Coriobacteriia 0 0 10 6 0 1 0 50 0 0 0 0 0 67 Bacteria Bacteria_none Actinomycetota Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia
Bacilli 0 8681 0 2 0 0 0 2 0 0 0 0 0 8685 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Bacilli
Clostridia 0 115 829 1446 0 2 1 6128 0 1 0 1 1 8524 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Clostridia
Negativicutes 0 64 3065 4967 7 1 4 16938 2 2 1 1 0 25052 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Negativicutes
Bacteroidia 0 3 1801 1151 4 0 2 3186 0 0 0 0 0 6147 Bacteria Bacteria_none Bacteroidota Bacteria;Bacteria_none;Bacteroidota;Bacteroidia
Flavobacteriia 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia
Epsilonproteobacteria 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Campylobacterota Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria
Fusobacteriia 0 14 0 0 0 0 0 1 0 0 0 0 0 15 Bacteria Bacteria_none Fusobacteriota Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia
Betaproteobacteria 0 215 102 168 0 0 0 602 0 0 0 0 0 1087 Bacteria Bacteria_none Pseudomonadota Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria
Gammaproteobacteria 1 24396 35289 46407 0 0 0 846 6 1 0 0 4 106950 Bacteria Bacteria_none Pseudomonadota Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unknown Unclassified;Unknown;Unknown;Unknown

Abundance table for the order rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

order GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class tax
Bifidobacteriales 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales
Micrococcales 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales
Mycobacteriales 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales
Coriobacteriales 0 0 10 6 0 1 0 48 0 0 0 0 0 65 Bacteria Bacteria_none Actinomycetota Coriobacteriia Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales
Eggerthellales 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales
Bacillales 0 351 0 0 0 0 0 1 0 0 0 0 0 352 Bacteria Bacteria_none Bacillota Bacilli Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales
Lactobacillales 0 8330 0 2 0 0 0 1 0 0 0 0 0 8333 Bacteria Bacteria_none Bacillota Bacilli Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales
Eubacteriales 0 114 74 246 0 0 0 236 0 0 0 0 0 670 Bacteria Bacteria_none Bacillota Clostridia Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales
Lachnospirales 0 1 755 1200 0 2 1 5892 0 1 0 1 1 7854 Bacteria Bacteria_none Bacillota Clostridia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales
Acidaminococcales 0 0 2390 3560 2 0 0 5097 1 0 1 0 0 11051 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales
Selenomonadales 0 3 323 681 2 1 2 6281 1 0 0 0 0 7294 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales
Veillonellales 0 61 352 726 3 0 2 5560 0 2 0 1 0 6707 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales
Bacteroidales 0 3 1801 1151 4 0 2 3186 0 0 0 0 0 6147 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales
Flavobacteriales 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Flavobacteriia Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales
Campylobacterales 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales
Fusobacteriales 0 14 0 0 0 0 0 1 0 0 0 0 0 15 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales
Burkholderiales 0 3 102 168 0 0 0 601 0 0 0 0 0 874 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales
Neisseriales 0 211 0 0 0 0 0 1 0 0 0 0 0 212 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales
Rhodocyclales 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales
Aeromonadales 0 0 35287 46406 0 0 0 736 2 0 0 0 4 82435 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales
Cardiobacteriales 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales
Enterobacterales 1 23234 2 1 0 0 0 109 4 1 0 0 0 23352 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales
Pasteurellales 0 1153 0 0 0 0 0 0 0 0 0 0 0 1153 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales
Pseudomonadales 0 8 0 0 0 0 0 1 0 0 0 0 0 9 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown

Abundance table for the family rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

family GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order tax
Bifidobacteriaceae 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae
Micrococcaceae 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae
Corynebacteriaceae 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae
Atopobiaceae 0 0 1 0 0 0 0 4 0 0 0 0 0 5 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae
Coriobacteriaceae 0 0 9 6 0 1 0 44 0 0 0 0 0 60 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae
Eggerthellaceae 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae
Gemellaceae 0 351 0 0 0 0 0 1 0 0 0 0 0 352 Bacteria Bacteria_none Bacillota Bacilli Bacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae
Aerococcaceae 0 49 0 0 0 0 0 0 0 0 0 0 0 49 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae
Carnobacteriaceae 0 11 0 0 0 0 0 0 0 0 0 0 0 11 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae
Enterococcaceae 0 746 0 0 0 0 0 0 0 0 0 0 0 746 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae
Lactobacillaceae 0 3910 0 0 0 0 0 0 0 0 0 0 0 3910 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae
Streptococcaceae 0 3614 0 2 0 0 0 1 0 0 0 0 0 3617 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae
Acutalibacteraceae 0 0 1 1 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae
Butyricicoccaceae 0 0 17 25 0 0 0 0 0 0 0 0 0 42 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae
Clostridiaceae 0 114 53 212 0 0 0 192 0 0 0 0 0 571 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae
Eubacteriaceae 0 0 0 0 0 0 0 5 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae
Oscillospiraceae 0 0 3 8 0 0 0 27 0 0 0 0 0 38 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae
Peptococcaceae 0 0 0 0 0 0 0 12 0 0 0 0 0 12 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae
Lachnospiraceae 0 1 755 1200 0 2 1 5892 0 1 0 1 1 7854 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae
Acidaminococcaceae 0 0 2390 3560 2 0 0 5097 1 0 1 0 0 11051 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae
Selenomonadaceae 0 3 323 681 2 1 2 6281 1 0 0 0 0 7294 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae
Veillonellaceae 0 61 352 726 3 0 2 5560 0 2 0 1 0 6707 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae
Bacteroidaceae 0 0 1311 736 4 0 1 904 0 0 0 0 0 2956 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae
Barnesiellaceae 0 0 47 27 0 0 0 1 0 0 0 0 0 75 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae
Muribaculaceae 0 0 4 2 0 0 0 32 0 0 0 0 0 38 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae
Prevotellaceae 0 3 338 289 0 0 1 1893 0 0 0 0 0 2524 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae
Tannerellaceae 0 0 101 97 0 0 0 356 0 0 0 0 0 554 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae
Flavobacteriaceae 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae
Campylobacteraceae 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae
Fusobacteriaceae 0 8 0 0 0 0 0 1 0 0 0 0 0 9 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae
Leptotrichiaceae 0 6 0 0 0 0 0 0 0 0 0 0 0 6 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae
Burkholderiaceae 0 1 0 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae
Comamonadaceae 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae
Sutterellaceae 0 0 102 168 0 0 0 600 0 0 0 0 0 870 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae
Neisseriaceae 0 211 0 0 0 0 0 1 0 0 0 0 0 212 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae
Rhodocyclaceae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae
Succinivibrionaceae 0 0 35287 46406 0 0 0 736 2 0 0 0 4 82435 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae
Cardiobacteriaceae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae
Enterobacteriaceae 1 23232 2 1 0 0 0 109 4 1 0 0 0 23350 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae
Erwiniaceae 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae
Pasteurellaceae 0 1153 0 0 0 0 0 0 0 0 0 0 0 1153 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae
Pseudomonadaceae 0 8 0 0 0 0 0 1 0 0 0 0 0 9 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown

Abundance table for the genus rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

genus GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order family tax
Bifidobacterium 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium
Micrococcus 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Micrococcaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Micrococcus
Corynebacterium 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium
Olsenella 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Olsenella
Parolsenella 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Parolsenella
Thermophilibacter 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Thermophilibacter
Collinsella 0 0 9 6 0 1 0 44 0 0 0 0 0 60 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella
Gordonibacter 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae;Gordonibacter
Gemella 0 351 0 0 0 0 0 1 0 0 0 0 0 352 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella
Abiotrophia 0 49 0 0 0 0 0 0 0 0 0 0 0 49 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia
Granulicatella 0 11 0 0 0 0 0 0 0 0 0 0 0 11 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella
Enterococcus 0 746 0 0 0 0 0 0 0 0 0 0 0 746 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus
Leuconostoc 0 3910 0 0 0 0 0 0 0 0 0 0 0 3910 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc
Streptococcus 0 3614 0 2 0 0 0 1 0 0 0 0 0 3617 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus
Anaeromassilibacillus 0 0 1 1 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Acutalibacteraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae;Anaeromassilibacillus
Butyricicoccus 0 0 17 25 0 0 0 0 0 0 0 0 0 42 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Butyricicoccaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae;Butyricicoccus
Clostridium 0 114 53 212 0 0 0 192 0 0 0 0 0 571 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium
Eubacterium 0 0 0 0 0 0 0 5 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Eubacteriaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae;Eubacterium
Drancourtella 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Drancourtella
Flavonifractor 0 0 0 0 0 0 0 25 0 0 0 0 0 25 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Flavonifractor
Oscillospiraceae_Incertae_sedis 0 0 3 8 0 0 0 0 0 0 0 0 0 11 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_Incertae_sedis
Peptococcus 0 0 0 0 0 0 0 12 0 0 0 0 0 12 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Peptococcaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae;Peptococcus
Anaerocolumna 0 0 1 7 0 0 0 19 0 0 0 0 0 27 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna
Bilifractor 0 0 16 26 0 0 0 262 0 0 0 0 0 304 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Bilifractor
Blautia 0 0 28 72 0 0 0 551 0 0 0 0 1 652 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia
Butyrivibrio 0 0 0 5 0 0 0 16 0 0 0 0 0 21 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio
Catenibacillus 0 0 0 0 0 0 0 14 0 0 0 0 0 14 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Catenibacillus
Cuneatibacter 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Cuneatibacter
Enterocloster 0 0 13 80 0 0 0 110 0 0 0 0 0 203 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster
Faecalicatena 0 0 10 18 0 0 0 67 0 0 0 0 0 95 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena
Faecalimonas 0 0 0 1 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalimonas
Fusicatenibacter 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Fusicatenibacter
Gluceribacter 0 0 0 3 0 0 0 7 0 0 0 0 0 10 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Gluceribacter
Hominisplanchenecus 0 0 4 10 0 0 0 20 0 0 0 0 0 34 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hominisplanchenecus
Hungatella 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hungatella
Jingyaoa 0 0 1 0 0 0 0 2 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Jingyaoa
Kineothrix 0 0 1 3 0 0 0 13 0 0 0 0 0 17 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Kineothrix
Lachnoanaerobaculum 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoanaerobaculum
Lachnoclostridium 0 0 4 2 0 0 0 19 0 0 0 0 0 25 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium
Lacrimispora 0 0 27 53 0 2 0 79 0 0 0 0 0 161 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora
Marvinbryantia 0 0 3 7 0 0 0 22 0 0 0 0 0 32 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Marvinbryantia
Mediterraneibacter 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Mediterraneibacter
Murimonas 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Murimonas
Oribacterium 0 0 496 645 0 0 1 4127 0 1 0 1 0 5271 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium
Porcincola 0 0 6 5 0 0 0 51 0 0 0 0 0 62 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Porcincola
Qiania 0 0 0 1 0 0 0 3 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Qiania
Roseburia 0 0 0 1 0 0 0 4 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia
Sporofaciens 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Sporofaciens
Waltera 0 0 11 8 0 0 0 63 0 0 0 0 0 82 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Waltera
Wansuia 0 0 133 251 0 0 0 437 0 0 0 0 0 821 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Wansuia
Phascolarctobacterium 0 0 2390 3560 2 0 0 5097 1 0 1 0 0 11051 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae;Phascolarctobacterium
Megamonas 0 1 323 681 2 1 2 6281 1 0 0 0 0 7292 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas
Selenomonas 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas
Allisonella 0 0 19 30 0 0 0 305 0 0 0 0 0 354 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Allisonella
Caecibacter 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Caecibacter
Colibacter 0 0 1 2 0 0 0 4 0 0 0 0 0 7 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Colibacter
Megasphaera 0 0 332 694 3 0 2 5249 0 2 0 1 0 6283 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera
Veillonella 0 61 0 0 0 0 0 1 0 0 0 0 0 62 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella
Bacteroides 0 0 163 68 0 0 1 139 0 0 0 0 0 371 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides
Phocaeicola 0 0 1148 668 4 0 0 765 0 0 0 0 0 2585 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola
Barnesiella 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Barnesiella
Coprobacter 0 0 47 27 0 0 0 0 0 0 0 0 0 74 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Coprobacter
Duncaniella 0 0 0 1 0 0 0 3 0 0 0 0 0 4 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella
Paramuribaculum 0 0 3 0 0 0 0 21 0 0 0 0 0 24 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Paramuribaculum
Sodaliphilus 0 0 1 1 0 0 0 8 0 0 0 0 0 10 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Sodaliphilus
Alloprevotella 0 0 2 5 0 0 0 5 0 0 0 0 0 12 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella
Hoylesella 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella
Leyella 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Leyella
Marseilla 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Marseilla
Metaprevotella 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Metaprevotella
Paraprevotella 0 0 19 2 0 0 0 3 0 0 0 0 0 24 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella
Prevotella 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella
Prevotellamassilia 0 0 242 146 0 0 0 418 0 0 0 0 0 806 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotellamassilia
Segatella 0 0 72 135 0 0 1 1466 0 0 0 0 0 1674 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella
Parabacteroides 0 0 101 97 0 0 0 356 0 0 0 0 0 554 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides
Capnocytophaga 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga
Campylobacter 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter
Fusobacterium 0 8 0 0 0 0 0 1 0 0 0 0 0 9 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium
Leptotrichia 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia
Pseudoleptotrichia 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Pseudoleptotrichia
Lautropia 0 1 0 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Lautropia
Ottowia 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia
Duodenibacillus 0 0 23 80 0 0 0 117 0 0 0 0 0 220 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Duodenibacillus
Sutterella 0 0 79 88 0 0 0 483 0 0 0 0 0 650 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella
Eikenella 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella
Kingella 0 6 0 0 0 0 0 0 0 0 0 0 0 6 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella
Neisseria 0 201 0 0 0 0 0 1 0 0 0 0 0 202 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria
Propionivibrio 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Propionivibrio
Anaerobiospirillum 0 0 35170 46258 0 0 0 520 2 0 0 0 4 81954 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum
Succinatimonas 0 0 29 36 0 0 0 214 0 0 0 0 0 279 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinatimonas
Succinivibrio 0 0 88 112 0 0 0 2 0 0 0 0 0 202 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinivibrio
Cardiobacterium 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae;Cardiobacterium
Enterobacter 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter
Escherichia 0 8969 2 0 0 0 0 36 0 0 0 0 0 9007 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia
Shigella 1 14263 0 0 0 0 0 73 4 1 0 0 0 14342 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella
Pantoea 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea
Actinobacillus 0 32 0 0 0 0 0 0 0 0 0 0 0 32 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus
Aggregatibacter 0 574 0 0 0 0 0 0 0 0 0 0 0 574 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter
Bibersteinia 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Bibersteinia
Canicola 0 254 0 0 0 0 0 0 0 0 0 0 0 254 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Canicola
Glaesserella 0 41 0 0 0 0 0 0 0 0 0 0 0 41 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella
Haemophilus 0 62 0 0 0 0 0 0 0 0 0 0 0 62 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus
Mannheimia 0 93 0 0 0 0 0 0 0 0 0 0 0 93 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia
Pasteurella 0 72 0 0 0 0 0 0 0 0 0 0 0 72 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella
Pasteurellaceae_Incertae_sedis 0 20 0 0 0 0 0 0 0 0 0 0 0 20 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis
Ursidibacter 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Ursidibacter
Pseudomonas 0 8 0 0 0 0 0 1 0 0 0 0 0 9 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Abundance table for the species rank.

Only taxa whose global abundance are above the abundance_threshold parameter will appear in the table.

species GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order family genus tax
Bifidobacterium aesculapii 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium aesculapii
Bifidobacterium callitrichos 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium callitrichos
Micrococcus flavus 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Micrococcus;Micrococcus flavus
Corynebacterium dentalis 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium dentalis
Olsenella phocaeensis 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Olsenella;Olsenella phocaeensis
Parolsenella catena 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Parolsenella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Parolsenella;Parolsenella catena
Thermophilibacter mediterraneus 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Thermophilibacter Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Thermophilibacter;Thermophilibacter mediterraneus
Collinsella intestinalis 0 0 4 2 0 1 0 6 0 0 0 0 0 13 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella intestinalis
Collinsella provencensis 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella provencensis
Collinsella stercoris 0 0 1 1 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella stercoris
Collinsella tanakaei 0 0 1 2 0 0 0 29 0 0 0 0 0 32 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella tanakaei
Collinsella vaginalis 0 0 2 1 0 0 0 9 0 0 0 0 0 12 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella vaginalis
Gordonibacter massiliensis (ex Traore et al. 2017) 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Gordonibacter Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae;Gordonibacter;Gordonibacter massiliensis (ex Traore et al. 2017)
Gemella haemolysans 0 47 0 0 0 0 0 1 0 0 0 0 0 48 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella haemolysans
Gemella morbillorum 0 49 0 0 0 0 0 0 0 0 0 0 0 49 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella morbillorum
Gemella parahaemolysans 0 229 0 0 0 0 0 0 0 0 0 0 0 229 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella parahaemolysans
Gemella taiwanensis 0 26 0 0 0 0 0 0 0 0 0 0 0 26 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella taiwanensis
Abiotrophia defectiva 0 49 0 0 0 0 0 0 0 0 0 0 0 49 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Aerococcaceae Abiotrophia Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia;Abiotrophia defectiva
Granulicatella adiacens 0 7 0 0 0 0 0 0 0 0 0 0 0 7 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella adiacens
Granulicatella balaenopterae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella balaenopterae
Granulicatella elegans 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella elegans
Enterococcus faecalis 0 733 0 0 0 0 0 0 0 0 0 0 0 733 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis
Enterococcus faecium 0 9 0 0 0 0 0 0 0 0 0 0 0 9 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecium
Enterococcus lactis 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus lactis
Leuconostoc citreum 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc citreum
Leuconostoc holzapfelii 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc holzapfelii
Leuconostoc lactis 0 3906 0 0 0 0 0 0 0 0 0 0 0 3906 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc lactis
Leuconostoc palmae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc palmae
Streptococcus cristatus 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus cristatus
Streptococcus downii 0 6 0 0 0 0 0 0 0 0 0 0 0 6 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus downii
Streptococcus himalayensis 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus himalayensis
Streptococcus ilei 0 312 0 0 0 0 0 0 0 0 0 0 0 312 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus ilei
Streptococcus intermedius 0 37 0 0 0 0 0 0 0 0 0 0 0 37 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus intermedius
Streptococcus koreensis 0 777 0 0 0 0 0 0 0 0 0 0 0 777 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus koreensis
Streptococcus lactarius 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus lactarius
Streptococcus mitis 0 15 0 0 0 0 0 0 0 0 0 0 0 15 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis
Streptococcus oralis 0 460 0 2 0 0 0 0 0 0 0 0 0 462 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oralis
Streptococcus oricebi 0 613 0 0 0 0 0 0 0 0 0 0 0 613 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oricebi
Streptococcus parasanguinis 0 175 0 0 0 0 0 0 0 0 0 0 0 175 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasanguinis
Streptococcus parasuis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasuis
Streptococcus peroris 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus peroris
Streptococcus porcorum 0 44 0 0 0 0 0 0 0 0 0 0 0 44 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus porcorum
Streptococcus rubneri 0 32 0 0 0 0 0 0 0 0 0 0 0 32 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus rubneri
Streptococcus sanguinis 0 212 0 0 0 0 0 1 0 0 0 0 0 213 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sanguinis
Streptococcus shenyangsis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus shenyangsis
Streptococcus sinensis 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sinensis
Streptococcus vulneris 0 914 0 0 0 0 0 0 0 0 0 0 0 914 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vulneris
Anaeromassilibacillus senegalensis 0 0 1 1 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Acutalibacteraceae Anaeromassilibacillus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae;Anaeromassilibacillus;Anaeromassilibacillus senegalensis
Butyricicoccus pullicaecorum 0 0 17 25 0 0 0 0 0 0 0 0 0 42 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae;Butyricicoccus;Butyricicoccus pullicaecorum
Clostridium fessum 0 0 7 12 0 0 0 23 0 0 0 0 0 42 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium fessum
Clostridium paraputrificum 0 33 0 0 0 0 0 0 0 0 0 0 0 33 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium paraputrificum
Clostridium perfringens 0 77 0 0 0 0 0 0 0 0 0 0 0 77 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium perfringens
Clostridium porci 0 0 46 200 0 0 0 165 0 0 0 0 0 411 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium porci
Clostridium tertium 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium tertium
Clostridium transplantifaecale 0 0 0 0 0 0 0 3 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium transplantifaecale
Clostridium vitabionis 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium vitabionis
Eubacterium callanderi 0 0 0 0 0 0 0 5 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae;Eubacterium;Eubacterium callanderi
Drancourtella massiliensis 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Drancourtella Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Drancourtella;Drancourtella massiliensis
Flavonifractor plautii 0 0 0 0 0 0 0 25 0 0 0 0 0 25 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Flavonifractor Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Flavonifractor;Flavonifractor plautii
[Clostridium] leptum 0 0 3 8 0 0 0 0 0 0 0 0 0 11 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Oscillospiraceae_Incertae_sedis Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_Incertae_sedis;[Clostridium] leptum
Peptococcus niger 0 0 0 0 0 0 0 12 0 0 0 0 0 12 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Peptococcaceae Peptococcus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae;Peptococcus;Peptococcus niger
Anaerocolumna aminovalerica 0 0 0 1 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna aminovalerica
Anaerocolumna cellulosilytica 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna cellulosilytica
Anaerocolumna chitinilytica 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna chitinilytica
Anaerocolumna jejuensis 0 0 1 5 0 0 0 16 0 0 0 0 0 22 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna jejuensis
Bilifractor porci 0 0 16 26 0 0 0 262 0 0 0 0 0 304 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bilifractor Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Bilifractor;Bilifractor porci
Blautia argi 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia argi
Blautia caecimuris 0 0 0 0 0 0 0 3 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia caecimuris
Blautia coccoides 0 0 0 0 0 0 0 6 0 0 0 0 0 6 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia coccoides
Blautia glucerasea 0 0 27 68 0 0 0 529 0 0 0 0 1 625 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia glucerasea
Blautia hominis 0 0 0 3 0 0 0 6 0 0 0 0 0 9 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia hominis
Blautia hydrogenotrophica 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia hydrogenotrophica
Blautia liquoris 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia liquoris
Blautia producta 0 0 0 0 0 0 0 4 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia producta
Blautia stercoris 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia stercoris
Butyrivibrio crossotus 0 0 0 1 0 0 0 5 0 0 0 0 0 6 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio crossotus
Butyrivibrio fibrisolvens 0 0 0 2 0 0 0 7 0 0 0 0 0 9 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio fibrisolvens
Butyrivibrio proteoclasticus 0 0 0 2 0 0 0 4 0 0 0 0 0 6 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio proteoclasticus
Catenibacillus scindens 0 0 0 0 0 0 0 14 0 0 0 0 0 14 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Catenibacillus Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Catenibacillus;Catenibacillus scindens
Cuneatibacter caecimuris 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Cuneatibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Cuneatibacter;Cuneatibacter caecimuris
Enterocloster bolteae 0 0 12 64 0 0 0 98 0 0 0 0 0 174 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster bolteae
Enterocloster citroniae 0 0 0 1 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster citroniae
Enterocloster clostridioformis 0 0 1 12 0 0 0 9 0 0 0 0 0 22 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster clostridioformis
Enterocloster hominis (ex Hitch et al. 2024) 0 0 0 3 0 0 0 2 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster hominis (ex Hitch et al. 2024)
Faecalicatena absiana 0 0 6 4 0 0 0 21 0 0 0 0 0 31 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena absiana
Faecalicatena contorta 0 0 2 13 0 0 0 26 0 0 0 0 0 41 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena contorta
Faecalicatena faecalis 0 0 0 0 0 0 0 10 0 0 0 0 0 10 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena faecalis
Faecalicatena orotica 0 0 2 1 0 0 0 10 0 0 0 0 0 13 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena orotica
Faecalimonas umbilicata 0 0 0 1 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalimonas Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalimonas;Faecalimonas umbilicata
Fusicatenibacter saccharivorans 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Fusicatenibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Fusicatenibacter;Fusicatenibacter saccharivorans
Gluceribacter canis 0 0 0 3 0 0 0 7 0 0 0 0 0 10 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Gluceribacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Gluceribacter;Gluceribacter canis
Hominisplanchenecus faecis 0 0 4 10 0 0 0 20 0 0 0 0 0 34 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Hominisplanchenecus Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hominisplanchenecus;Hominisplanchenecus faecis
Hungatella effluvii 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hungatella;Hungatella effluvii
Jingyaoa shaoxingensis 0 0 1 0 0 0 0 2 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Jingyaoa Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Jingyaoa;Jingyaoa shaoxingensis
Kineothrix alysoides 0 0 1 3 0 0 0 13 0 0 0 0 0 17 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Kineothrix;Kineothrix alysoides
Lachnoanaerobaculum gingivalis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoanaerobaculum;Lachnoanaerobaculum gingivalis
Lachnoclostridium edouardi 0 0 3 1 0 0 0 2 0 0 0 0 0 6 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;Lachnoclostridium edouardi
Lachnoclostridium urinimassiliense 0 0 0 0 0 0 0 15 0 0 0 0 0 15 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;Lachnoclostridium urinimassiliense
[Clostridium] polysaccharolyticum 0 0 1 1 0 0 0 2 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;[Clostridium] polysaccharolyticum
Lacrimispora amygdalina 0 0 8 11 0 0 0 15 0 0 0 0 0 34 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora amygdalina
Lacrimispora celerecrescens 0 0 8 14 0 2 0 38 0 0 0 0 0 62 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora celerecrescens
Lacrimispora indolis 0 0 5 9 0 0 0 11 0 0 0 0 0 25 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora indolis
Lacrimispora saccharolytica 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora saccharolytica
Lacrimispora sphenoides 0 0 5 12 0 0 0 14 0 0 0 0 0 31 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora sphenoides
Lacrimispora xylanisolvens 0 0 0 7 0 0 0 0 0 0 0 0 0 7 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora xylanisolvens
Marvinbryantia formatexigens 0 0 3 7 0 0 0 22 0 0 0 0 0 32 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Marvinbryantia;Marvinbryantia formatexigens
Mediterraneibacter faecis 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Mediterraneibacter;Mediterraneibacter faecis
Murimonas intestini 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Murimonas Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Murimonas;Murimonas intestini
Oribacterium asaccharolyticum 0 0 36 43 0 0 0 231 0 0 0 0 0 310 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium asaccharolyticum
Oribacterium parvum 0 0 222 323 0 0 0 1768 0 1 0 0 0 2314 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium parvum
Oribacterium sinus 0 0 238 279 0 0 1 2128 0 0 0 1 0 2647 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium sinus
Porcincola intestinalis 0 0 6 5 0 0 0 51 0 0 0 0 0 62 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Porcincola Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Porcincola;Porcincola intestinalis
Qiania dongpingensis 0 0 0 1 0 0 0 3 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Qiania Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Qiania;Qiania dongpingensis
Roseburia faecis 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia;Roseburia faecis
Roseburia porci 0 0 0 1 0 0 0 3 0 0 0 0 0 4 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia;Roseburia porci
Sporofaciens musculi 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Sporofaciens Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Sporofaciens;Sporofaciens musculi
Waltera intestinalis 0 0 11 8 0 0 0 63 0 0 0 0 0 82 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Waltera Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Waltera;Waltera intestinalis
Wansuia hejianensis 0 0 133 251 0 0 0 437 0 0 0 0 0 821 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Wansuia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Wansuia;Wansuia hejianensis
Phascolarctobacterium wakonense 0 0 2390 3560 2 0 0 5097 1 0 1 0 0 11051 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae;Phascolarctobacterium;Phascolarctobacterium wakonense
Megamonas funiformis 0 1 210 438 1 1 0 4115 1 0 0 0 0 4767 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas funiformis
Megamonas hypermegale 0 0 110 240 1 0 1 2080 0 0 0 0 0 2432 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas hypermegale
Megamonas rupellensis 0 0 3 3 0 0 1 86 0 0 0 0 0 93 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas rupellensis
Selenomonas flueggei 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas;Selenomonas flueggei
Selenomonas noxia 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas;Selenomonas noxia
Allisonella histaminiformans 0 0 19 30 0 0 0 305 0 0 0 0 0 354 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Allisonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Allisonella;Allisonella histaminiformans
Caecibacter massiliensis 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Caecibacter Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Caecibacter;Caecibacter massiliensis
Colibacter massiliensis 0 0 1 2 0 0 0 4 0 0 0 0 0 7 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Colibacter Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Colibacter;Colibacter massiliensis
Megasphaera cerevisiae 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera cerevisiae
Megasphaera elsdenii 0 0 122 255 2 0 0 2138 0 2 0 0 0 2519 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera elsdenii
Megasphaera hexanoica 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera hexanoica
Megasphaera indica 0 0 63 128 0 0 1 873 0 0 0 0 0 1065 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera indica
Megasphaera massiliensis 0 0 64 127 0 0 0 566 0 0 0 0 0 757 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera massiliensis
Megasphaera micronuciformis 0 0 2 5 0 0 0 30 0 0 0 0 0 37 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera micronuciformis
Megasphaera paucivorans 0 0 33 78 1 0 1 840 0 0 0 0 0 953 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera paucivorans
Megasphaera stantonii 0 0 47 89 0 0 0 729 0 0 0 1 0 866 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera stantonii
Megasphaera vaginalis (ex Bordigoni et al. 2020) 0 0 1 12 0 0 0 69 0 0 0 0 0 82 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera vaginalis (ex Bordigoni et al. 2020)
Megasphaera vaginalis (ex Srinivasan et al. 2021) 0 0 0 0 0 0 0 2 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera vaginalis (ex Srinivasan et al. 2021)
Veillonella massiliensis 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella massiliensis
Veillonella parvula 0 51 0 0 0 0 0 1 0 0 0 0 0 52 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella parvula
Veillonella rogosae 0 5 0 0 0 0 0 0 0 0 0 0 0 5 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella rogosae
Veillonella tobetsuensis 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella tobetsuensis
Bacteroides caecigallinarum 0 0 0 0 0 0 0 4 0 0 0 0 0 4 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides caecigallinarum
Bacteroides finegoldii 0 0 4 3 0 0 0 0 0 0 0 0 0 7 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides finegoldii
Bacteroides humanifaecis 0 0 42 22 0 0 0 8 0 0 0 0 0 72 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides humanifaecis
Bacteroides koreensis 0 0 1 0 0 0 0 4 0 0 0 0 0 5 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides koreensis
Bacteroides kribbi 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides kribbi
Bacteroides mediterraneensis 0 0 28 26 0 0 1 111 0 0 0 0 0 166 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides mediterraneensis
Bacteroides ovatus 0 0 0 0 0 0 0 6 0 0 0 0 0 6 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides ovatus
Bacteroides stercoris 0 0 16 6 0 0 0 3 0 0 0 0 0 25 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides stercoris
Bacteroides uniformis 0 0 71 9 0 0 0 0 0 0 0 0 0 80 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides uniformis
Bacteroides xylanisolvens 0 0 1 1 0 0 0 2 0 0 0 0 0 4 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides xylanisolvens
Bacteroides zhangwenhongii 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides zhangwenhongii
Phocaeicola barnesiae 0 0 3 2 0 0 0 22 0 0 0 0 0 27 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola barnesiae
Phocaeicola dorei 0 0 63 30 0 0 0 21 0 0 0 0 0 114 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola dorei
Phocaeicola faecalis 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola faecalis
Phocaeicola massiliensis 0 0 11 9 0 0 0 0 0 0 0 0 0 20 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola massiliensis
Phocaeicola plebeius 0 0 870 407 2 0 0 198 0 0 0 0 0 1477 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola plebeius
Phocaeicola sartorii 0 0 107 87 1 0 0 358 0 0 0 0 0 553 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola sartorii
Phocaeicola vulgatus 0 0 94 132 1 0 0 166 0 0 0 0 0 393 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola vulgatus
Barnesiella viscericola 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Barnesiella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Barnesiella;Barnesiella viscericola
Coprobacter fastidiosus 0 0 47 27 0 0 0 0 0 0 0 0 0 74 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Coprobacter;Coprobacter fastidiosus
Duncaniella freteri 0 0 0 1 0 0 0 3 0 0 0 0 0 4 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Duncaniella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri
Paramuribaculum intestinale 0 0 3 0 0 0 0 21 0 0 0 0 0 24 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Paramuribaculum Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Paramuribaculum;Paramuribaculum intestinale
Sodaliphilus pleomorphus 0 0 1 1 0 0 0 8 0 0 0 0 0 10 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Sodaliphilus;Sodaliphilus pleomorphus
Alloprevotella rava 0 0 0 1 0 0 0 2 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella;Alloprevotella rava
Alloprevotella tannerae 0 0 2 4 0 0 0 3 0 0 0 0 0 9 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella;Alloprevotella tannerae
Hoylesella loescheii 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella;Hoylesella loescheii
Hoylesella nanceiensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella;Hoylesella nanceiensis
Leyella stercorea 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Leyella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Leyella;Leyella stercorea
Marseilla massiliensis 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Marseilla Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Marseilla;Marseilla massiliensis
Metaprevotella massiliensis 0 0 1 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Metaprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Metaprevotella;Metaprevotella massiliensis
Paraprevotella clara 0 0 18 2 0 0 0 1 0 0 0 0 0 21 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella;Paraprevotella clara
Paraprevotella xylaniphila 0 0 1 0 0 0 0 2 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella;Paraprevotella xylaniphila
Prevotella denticola 0 0 1 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella;Prevotella denticola
Prevotellamassilia timonensis 0 0 242 146 0 0 0 418 0 0 0 0 0 806 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotellamassilia Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotellamassilia;Prevotellamassilia timonensis
Segatella baroniae 0 0 40 34 0 0 0 96 0 0 0 0 0 170 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella baroniae
Segatella buccae 0 0 8 5 0 0 0 19 0 0 0 0 0 32 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella buccae
Segatella copri 0 0 21 96 0 0 1 1347 0 0 0 0 0 1465 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella copri
Segatella maculosa 0 0 2 0 0 0 0 2 0 0 0 0 0 4 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella maculosa
Segatella oris 0 0 1 0 0 0 0 2 0 0 0 0 0 3 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella oris
Parabacteroides distasonis 0 0 74 63 0 0 0 23 0 0 0 0 0 160 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides distasonis
Parabacteroides johnsonii 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides johnsonii
Parabacteroides merdae 0 0 27 34 0 0 0 332 0 0 0 0 0 393 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides merdae
Capnocytophaga gingivalis 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga gingivalis
Capnocytophaga sputigena 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga sputigena
Campylobacter gracilis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter gracilis
Campylobacter massiliensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter massiliensis
Campylobacter showae 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter showae
Fusobacterium hwasookii 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium hwasookii
Fusobacterium massiliense 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium massiliense
Fusobacterium mortiferum 0 0 0 0 0 0 0 1 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium mortiferum
Fusobacterium polymorphum 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium polymorphum
Fusobacterium vincentii 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium vincentii
Leptotrichia massiliensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia;Leptotrichia massiliensis
Leptotrichia trevisanii 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia;Leptotrichia trevisanii
Pseudoleptotrichia goodfellowii 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Pseudoleptotrichia;Pseudoleptotrichia goodfellowii
Lautropia mirabilis 0 1 0 0 0 0 0 1 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Lautropia;Lautropia mirabilis
Ottowia beijingensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia;Ottowia beijingensis
Ottowia shaoguanensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia;Ottowia shaoguanensis
Duodenibacillus massiliensis 0 0 23 80 0 0 0 117 0 0 0 0 0 220 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Duodenibacillus Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Duodenibacillus;Duodenibacillus massiliensis
Sutterella faecalis 0 0 12 27 0 0 0 97 0 0 0 0 0 136 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella;Sutterella faecalis
Sutterella seckii 0 0 67 61 0 0 0 386 0 0 0 0 0 514 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella;Sutterella seckii
Eikenella corrodens 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella corrodens
Eikenella exigua 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella exigua
Eikenella halliae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella halliae
Kingella bonacorsii 0 4 0 0 0 0 0 0 0 0 0 0 0 4 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella;Kingella bonacorsii
Kingella kingae 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella;Kingella kingae
Neisseria elongata 0 23 0 0 0 0 0 0 0 0 0 0 0 23 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria elongata
Neisseria macacae 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria macacae
Neisseria mucosa 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria mucosa
Neisseria oralis 0 107 0 0 0 0 0 1 0 0 0 0 0 108 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria oralis
Neisseria perflava 0 69 0 0 0 0 0 0 0 0 0 0 0 69 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria perflava
Propionivibrio pelophilus 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Propionivibrio Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Propionivibrio;Propionivibrio pelophilus
Anaerobiospirillum succiniciproducens 0 0 58 64 0 0 0 0 0 0 0 0 0 122 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum;Anaerobiospirillum succiniciproducens
Anaerobiospirillum thomasii 0 0 35112 46194 0 0 0 520 2 0 0 0 4 81832 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum;Anaerobiospirillum thomasii
Succinatimonas hippei 0 0 29 36 0 0 0 214 0 0 0 0 0 279 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinatimonas;Succinatimonas hippei
Succinivibrio dextrinosolvens 0 0 88 112 0 0 0 2 0 0 0 0 0 202 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinivibrio Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinivibrio;Succinivibrio dextrinosolvens
Cardiobacterium valvarum 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae;Cardiobacterium;Cardiobacterium valvarum
Enterobacter soli 0 0 0 1 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter;Enterobacter soli
Escherichia albertii 0 10 0 0 0 0 0 2 0 0 0 0 0 12 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia albertii
Escherichia coli 0 27 0 0 0 0 0 0 0 0 0 0 0 27 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia coli
Escherichia fergusonii 0 7435 2 0 0 0 0 30 0 0 0 0 0 7467 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia fergusonii
Escherichia marmotae 0 1497 0 0 0 0 0 4 0 0 0 0 0 1501 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia marmotae
Shigella boydii 1 2226 0 0 0 0 0 2 1 0 0 0 0 2230 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella boydii
Shigella dysenteriae 0 25 0 0 0 0 0 0 0 1 0 0 0 26 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella dysenteriae
Shigella flexneri 0 11889 0 0 0 0 0 60 3 0 0 0 0 11952 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella flexneri
Shigella sonnei 0 123 0 0 0 0 0 11 0 0 0 0 0 134 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella sonnei
Pantoea agglomerans 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea agglomerans
Pantoea endophytica 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea endophytica
Actinobacillus capsulatus 0 32 0 0 0 0 0 0 0 0 0 0 0 32 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Actinobacillus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus;Actinobacillus capsulatus
Aggregatibacter actinomycetemcomitans 0 9 0 0 0 0 0 0 0 0 0 0 0 9 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus 0 124 0 0 0 0 0 0 0 0 0 0 0 124 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter aphrophilus
Aggregatibacter kilianii 0 441 0 0 0 0 0 0 0 0 0 0 0 441 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter kilianii
Bibersteinia trehalosi 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bibersteinia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Bibersteinia;Bibersteinia trehalosi
Canicola haemoglobinophilus 0 254 0 0 0 0 0 0 0 0 0 0 0 254 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Canicola Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Canicola;Canicola haemoglobinophilus
Glaesserella australis 0 9 0 0 0 0 0 0 0 0 0 0 0 9 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella;Glaesserella australis
Glaesserella parasuis 0 32 0 0 0 0 0 0 0 0 0 0 0 32 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella;Glaesserella parasuis
Haemophilus haemolyticus 0 3 0 0 0 0 0 0 0 0 0 0 0 3 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus haemolyticus
Haemophilus massiliensis 0 51 0 0 0 0 0 0 0 0 0 0 0 51 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus massiliensis
Haemophilus parahaemolyticus 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus parahaemolyticus
Haemophilus pittmaniae 0 7 0 0 0 0 0 0 0 0 0 0 0 7 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus pittmaniae
Mannheimia glucosida 0 10 0 0 0 0 0 0 0 0 0 0 0 10 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia glucosida
Mannheimia granulomatis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia granulomatis
Mannheimia massilioguelmaensis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia massilioguelmaensis
Mannheimia ruminalis 0 81 0 0 0 0 0 0 0 0 0 0 0 81 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia ruminalis
Pasteurella dagmatis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella dagmatis
Pasteurella multocida 0 68 0 0 0 0 0 0 0 0 0 0 0 68 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella multocida
Pasteurella oralis 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella oralis
Pasteurella stomatis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella stomatis
[Haemophilus] felis 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurellaceae_Incertae_sedis Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis;[Haemophilus] felis
[Pasteurella] aerogenes 0 19 0 0 0 0 0 0 0 0 0 0 0 19 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurellaceae_Incertae_sedis Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis;[Pasteurella] aerogenes
Ursidibacter maritimus 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Ursidibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Ursidibacter;Ursidibacter maritimus
Pseudomonas bubulae 0 5 0 0 0 0 0 1 0 0 0 0 0 6 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas bubulae
Pseudomonas fragi 0 2 0 0 0 0 0 0 0 0 0 0 0 2 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas fragi
Pseudomonas paraversuta 0 1 0 0 0 0 0 0 0 0 0 0 0 1 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas paraversuta
Unknown 0 277 568 524 0 0 0 260 0 0 0 0 0 1629 Unclassified Unknown Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the phylum rank.

All samples have been randomly subsetted to have the same number of reads.

phylum GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom tax
Actinomycetota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Actinomycetota
Bacillota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Bacillota
Bacteroidota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Bacteroidota
Campylobacterota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Campylobacterota
Fusobacteriota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Fusobacteriota
Pseudomonadota 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteria;Bacteria_none;Pseudomonadota
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unclassified;Unknown;Unknown

Rarefied abundance table for the class rank.

All samples have been randomly subsetted to have the same number of reads.

class GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum tax
Actinomycetes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Bacteria;Bacteria_none;Actinomycetota;Actinomycetes
Coriobacteriia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia
Bacilli 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Bacilli
Clostridia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Clostridia
Negativicutes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacteria;Bacteria_none;Bacillota;Negativicutes
Bacteroidia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteria;Bacteria_none;Bacteroidota;Bacteroidia
Flavobacteriia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia
Epsilonproteobacteria 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria
Fusobacteriia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia
Betaproteobacteria 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria
Gammaproteobacteria 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unknown Unclassified;Unknown;Unknown;Unknown

Rarefied abundance table for the order rank.

All samples have been randomly subsetted to have the same number of reads.

order GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class tax
Bifidobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales
Micrococcales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales
Mycobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales
Coriobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales
Eggerthellales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales
Bacillales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales
Lactobacillales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales
Eubacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales
Lachnospirales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales
Acidaminococcales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales
Selenomonadales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales
Veillonellales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales
Bacteroidales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales
Flavobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Flavobacteriia Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales
Campylobacterales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales
Fusobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales
Burkholderiales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales
Neisseriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales
Rhodocyclales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales
Aeromonadales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales
Cardiobacteriales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales
Enterobacterales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales
Pasteurellales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales
Pseudomonadales 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the family rank.

All samples have been randomly subsetted to have the same number of reads.

family GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order tax
Bifidobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae
Micrococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae
Corynebacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae
Atopobiaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae
Coriobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae
Eggerthellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae
Gemellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae
Aerococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae
Carnobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae
Enterococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae
Lactobacillaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae
Streptococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae
Acutalibacteraceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae
Butyricicoccaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae
Clostridiaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae
Eubacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae
Oscillospiraceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae
Peptococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae
Lachnospiraceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae
Acidaminococcaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae
Selenomonadaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae
Veillonellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae
Bacteroidaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae
Barnesiellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae
Muribaculaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae
Prevotellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae
Tannerellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae
Flavobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae
Campylobacteraceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae
Fusobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae
Leptotrichiaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae
Burkholderiaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae
Comamonadaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae
Sutterellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae
Neisseriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae
Rhodocyclaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae
Succinivibrionaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae
Cardiobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae
Enterobacteriaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae
Erwiniaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae
Pasteurellaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae
Pseudomonadaceae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the genus rank.

All samples have been randomly subsetted to have the same number of reads.

genus GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order family tax
Bifidobacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium
Micrococcus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Micrococcaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Micrococcus
Corynebacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium
Olsenella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Olsenella
Parolsenella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Parolsenella
Thermophilibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Thermophilibacter
Collinsella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella
Gordonibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae;Gordonibacter
Gemella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella
Abiotrophia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Aerococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia
Granulicatella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella
Enterococcus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus
Leuconostoc 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc
Streptococcus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus
Anaeromassilibacillus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Acutalibacteraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae;Anaeromassilibacillus
Butyricicoccus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Butyricicoccaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae;Butyricicoccus
Clostridium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium
Eubacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Eubacteriaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae;Eubacterium
Drancourtella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Drancourtella
Flavonifractor 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Flavonifractor
Oscillospiraceae_Incertae_sedis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_Incertae_sedis
Peptococcus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Peptococcaceae Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae;Peptococcus
Anaerocolumna 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna
Bilifractor 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Bilifractor
Blautia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia
Butyrivibrio 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio
Catenibacillus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Catenibacillus
Cuneatibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Cuneatibacter
Enterocloster 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster
Faecalicatena 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena
Faecalimonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalimonas
Fusicatenibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Fusicatenibacter
Gluceribacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Gluceribacter
Hominisplanchenecus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hominisplanchenecus
Hungatella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hungatella
Jingyaoa 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Jingyaoa
Kineothrix 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Kineothrix
Lachnoanaerobaculum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoanaerobaculum
Lachnoclostridium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium
Lacrimispora 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora
Marvinbryantia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Marvinbryantia
Mediterraneibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Mediterraneibacter
Murimonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Murimonas
Oribacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium
Porcincola 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Porcincola
Qiania 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Qiania
Roseburia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia
Sporofaciens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Sporofaciens
Waltera 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Waltera
Wansuia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Wansuia
Phascolarctobacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae;Phascolarctobacterium
Megamonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas
Selenomonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas
Allisonella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Allisonella
Caecibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Caecibacter
Colibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Colibacter
Megasphaera 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera
Veillonella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella
Bacteroides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides
Phocaeicola 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola
Barnesiella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Barnesiella
Coprobacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Coprobacter
Duncaniella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella
Paramuribaculum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Paramuribaculum
Sodaliphilus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Sodaliphilus
Alloprevotella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella
Hoylesella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella
Leyella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Leyella
Marseilla 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Marseilla
Metaprevotella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Metaprevotella
Paraprevotella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella
Prevotella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella
Prevotellamassilia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotellamassilia
Segatella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella
Parabacteroides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides
Capnocytophaga 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga
Campylobacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter
Fusobacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium
Leptotrichia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia
Pseudoleptotrichia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Pseudoleptotrichia
Lautropia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Lautropia
Ottowia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia
Duodenibacillus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Duodenibacillus
Sutterella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella
Eikenella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella
Kingella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella
Neisseria 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria
Propionivibrio 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Propionivibrio
Anaerobiospirillum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum
Succinatimonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinatimonas
Succinivibrio 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinivibrio
Cardiobacterium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae;Cardiobacterium
Enterobacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter
Escherichia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia
Shigella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella
Pantoea 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea
Actinobacillus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus
Aggregatibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter
Bibersteinia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Bibersteinia
Canicola 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Canicola
Glaesserella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella
Haemophilus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus
Mannheimia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia
Pasteurella 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella
Pasteurellaceae_Incertae_sedis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis
Ursidibacter 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Ursidibacter
Pseudomonas 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Rarefied abundance table for the species rank.

All samples have been randomly subsetted to have the same number of reads.

species GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total superkingdom kingdom phylum class order family genus tax
Bifidobacterium aesculapii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium aesculapii
Bifidobacterium callitrichos 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Bifidobacteriales;Bifidobacteriaceae;Bifidobacterium;Bifidobacterium callitrichos
Micrococcus flavus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Micrococcales;Micrococcaceae;Micrococcus;Micrococcus flavus
Corynebacterium dentalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Bacteria;Bacteria_none;Actinomycetota;Actinomycetes;Mycobacteriales;Corynebacteriaceae;Corynebacterium;Corynebacterium dentalis
Olsenella phocaeensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Olsenella;Olsenella phocaeensis
Parolsenella catena 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Parolsenella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Parolsenella;Parolsenella catena
Thermophilibacter mediterraneus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Thermophilibacter Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Atopobiaceae;Thermophilibacter;Thermophilibacter mediterraneus
Collinsella intestinalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella intestinalis
Collinsella provencensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella provencensis
Collinsella stercoris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella stercoris
Collinsella tanakaei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella tanakaei
Collinsella vaginalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Coriobacteriales;Coriobacteriaceae;Collinsella;Collinsella vaginalis
Gordonibacter massiliensis (ex Traore et al. 2017) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Gordonibacter Bacteria;Bacteria_none;Actinomycetota;Coriobacteriia;Eggerthellales;Eggerthellaceae;Gordonibacter;Gordonibacter massiliensis (ex Traore et al. 2017)
Gemella haemolysans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella haemolysans
Gemella morbillorum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella morbillorum
Gemella parahaemolysans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella parahaemolysans
Gemella taiwanensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Bacillales Gemellaceae Gemella Bacteria;Bacteria_none;Bacillota;Bacilli;Bacillales;Gemellaceae;Gemella;Gemella taiwanensis
Abiotrophia defectiva 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Aerococcaceae Abiotrophia Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Aerococcaceae;Abiotrophia;Abiotrophia defectiva
Granulicatella adiacens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella adiacens
Granulicatella balaenopterae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella balaenopterae
Granulicatella elegans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Carnobacteriaceae;Granulicatella;Granulicatella elegans
Enterococcus faecalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecalis
Enterococcus faecium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus faecium
Enterococcus lactis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Enterococcaceae;Enterococcus;Enterococcus lactis
Leuconostoc citreum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc citreum
Leuconostoc holzapfelii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc holzapfelii
Leuconostoc lactis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc lactis
Leuconostoc palmae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Lactobacillaceae;Leuconostoc;Leuconostoc palmae
Streptococcus cristatus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus cristatus
Streptococcus downii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus downii
Streptococcus himalayensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus himalayensis
Streptococcus ilei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus ilei
Streptococcus intermedius 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus intermedius
Streptococcus koreensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus koreensis
Streptococcus lactarius 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus lactarius
Streptococcus mitis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus mitis
Streptococcus oralis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oralis
Streptococcus oricebi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus oricebi
Streptococcus parasanguinis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasanguinis
Streptococcus parasuis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus parasuis
Streptococcus peroris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus peroris
Streptococcus porcorum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus porcorum
Streptococcus rubneri 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus rubneri
Streptococcus sanguinis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sanguinis
Streptococcus shenyangsis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus shenyangsis
Streptococcus sinensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus sinensis
Streptococcus vulneris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Bacteria;Bacteria_none;Bacillota;Bacilli;Lactobacillales;Streptococcaceae;Streptococcus;Streptococcus vulneris
Anaeromassilibacillus senegalensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Acutalibacteraceae Anaeromassilibacillus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Acutalibacteraceae;Anaeromassilibacillus;Anaeromassilibacillus senegalensis
Butyricicoccus pullicaecorum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Butyricicoccaceae;Butyricicoccus;Butyricicoccus pullicaecorum
Clostridium fessum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium fessum
Clostridium paraputrificum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium paraputrificum
Clostridium perfringens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium perfringens
Clostridium porci 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium porci
Clostridium tertium 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium tertium
Clostridium transplantifaecale 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium transplantifaecale
Clostridium vitabionis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Clostridiaceae;Clostridium;Clostridium vitabionis
Eubacterium callanderi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Eubacteriaceae;Eubacterium;Eubacterium callanderi
Drancourtella massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Drancourtella Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Drancourtella;Drancourtella massiliensis
Flavonifractor plautii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Flavonifractor Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Flavonifractor;Flavonifractor plautii
[Clostridium] leptum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Oscillospiraceae Oscillospiraceae_Incertae_sedis Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Oscillospiraceae;Oscillospiraceae_Incertae_sedis;[Clostridium] leptum
Peptococcus niger 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Eubacteriales Peptococcaceae Peptococcus Bacteria;Bacteria_none;Bacillota;Clostridia;Eubacteriales;Peptococcaceae;Peptococcus;Peptococcus niger
Anaerocolumna aminovalerica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna aminovalerica
Anaerocolumna cellulosilytica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna cellulosilytica
Anaerocolumna chitinilytica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna chitinilytica
Anaerocolumna jejuensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Anaerocolumna;Anaerocolumna jejuensis
Bilifractor porci 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Bilifractor Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Bilifractor;Bilifractor porci
Blautia argi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia argi
Blautia caecimuris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia caecimuris
Blautia coccoides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia coccoides
Blautia glucerasea 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia glucerasea
Blautia hominis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia hominis
Blautia hydrogenotrophica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia hydrogenotrophica
Blautia liquoris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia liquoris
Blautia producta 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia producta
Blautia stercoris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Blautia;Blautia stercoris
Butyrivibrio crossotus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio crossotus
Butyrivibrio fibrisolvens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio fibrisolvens
Butyrivibrio proteoclasticus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Butyrivibrio;Butyrivibrio proteoclasticus
Catenibacillus scindens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Catenibacillus Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Catenibacillus;Catenibacillus scindens
Cuneatibacter caecimuris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Cuneatibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Cuneatibacter;Cuneatibacter caecimuris
Enterocloster bolteae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster bolteae
Enterocloster citroniae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster citroniae
Enterocloster clostridioformis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster clostridioformis
Enterocloster hominis (ex Hitch et al. 2024) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Enterocloster;Enterocloster hominis (ex Hitch et al. 2024)
Faecalicatena absiana 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena absiana
Faecalicatena contorta 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena contorta
Faecalicatena faecalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena faecalis
Faecalicatena orotica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalicatena;Faecalicatena orotica
Faecalimonas umbilicata 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalimonas Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Faecalimonas;Faecalimonas umbilicata
Fusicatenibacter saccharivorans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Fusicatenibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Fusicatenibacter;Fusicatenibacter saccharivorans
Gluceribacter canis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Gluceribacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Gluceribacter;Gluceribacter canis
Hominisplanchenecus faecis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Hominisplanchenecus Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hominisplanchenecus;Hominisplanchenecus faecis
Hungatella effluvii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Hungatella;Hungatella effluvii
Jingyaoa shaoxingensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Jingyaoa Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Jingyaoa;Jingyaoa shaoxingensis
Kineothrix alysoides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Kineothrix;Kineothrix alysoides
Lachnoanaerobaculum gingivalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoanaerobaculum;Lachnoanaerobaculum gingivalis
Lachnoclostridium edouardi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;Lachnoclostridium edouardi
Lachnoclostridium urinimassiliense 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;Lachnoclostridium urinimassiliense
[Clostridium] polysaccharolyticum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lachnoclostridium;[Clostridium] polysaccharolyticum
Lacrimispora amygdalina 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora amygdalina
Lacrimispora celerecrescens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora celerecrescens
Lacrimispora indolis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora indolis
Lacrimispora saccharolytica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora saccharolytica
Lacrimispora sphenoides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora sphenoides
Lacrimispora xylanisolvens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Lacrimispora;Lacrimispora xylanisolvens
Marvinbryantia formatexigens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Marvinbryantia;Marvinbryantia formatexigens
Mediterraneibacter faecis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Mediterraneibacter;Mediterraneibacter faecis
Murimonas intestini 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Murimonas Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Murimonas;Murimonas intestini
Oribacterium asaccharolyticum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium asaccharolyticum
Oribacterium parvum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium parvum
Oribacterium sinus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Oribacterium;Oribacterium sinus
Porcincola intestinalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Porcincola Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Porcincola;Porcincola intestinalis
Qiania dongpingensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Qiania Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Qiania;Qiania dongpingensis
Roseburia faecis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia;Roseburia faecis
Roseburia porci 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Roseburia;Roseburia porci
Sporofaciens musculi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Sporofaciens Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Sporofaciens;Sporofaciens musculi
Waltera intestinalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Waltera Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Waltera;Waltera intestinalis
Wansuia hejianensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Clostridia Lachnospirales Lachnospiraceae Wansuia Bacteria;Bacteria_none;Bacillota;Clostridia;Lachnospirales;Lachnospiraceae;Wansuia;Wansuia hejianensis
Phascolarctobacterium wakonense 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Bacteria;Bacteria_none;Bacillota;Negativicutes;Acidaminococcales;Acidaminococcaceae;Phascolarctobacterium;Phascolarctobacterium wakonense
Megamonas funiformis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas funiformis
Megamonas hypermegale 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas hypermegale
Megamonas rupellensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Megamonas;Megamonas rupellensis
Selenomonas flueggei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas;Selenomonas flueggei
Selenomonas noxia 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Bacteria;Bacteria_none;Bacillota;Negativicutes;Selenomonadales;Selenomonadaceae;Selenomonas;Selenomonas noxia
Allisonella histaminiformans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Allisonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Allisonella;Allisonella histaminiformans
Caecibacter massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Caecibacter Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Caecibacter;Caecibacter massiliensis
Colibacter massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Colibacter Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Colibacter;Colibacter massiliensis
Megasphaera cerevisiae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera cerevisiae
Megasphaera elsdenii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera elsdenii
Megasphaera hexanoica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera hexanoica
Megasphaera indica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera indica
Megasphaera massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera massiliensis
Megasphaera micronuciformis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera micronuciformis
Megasphaera paucivorans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera paucivorans
Megasphaera stantonii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera stantonii
Megasphaera vaginalis (ex Bordigoni et al. 2020) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera vaginalis (ex Bordigoni et al. 2020)
Megasphaera vaginalis (ex Srinivasan et al. 2021) 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Megasphaera;Megasphaera vaginalis (ex Srinivasan et al. 2021)
Veillonella massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella massiliensis
Veillonella parvula 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella parvula
Veillonella rogosae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella rogosae
Veillonella tobetsuensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Bacteria;Bacteria_none;Bacillota;Negativicutes;Veillonellales;Veillonellaceae;Veillonella;Veillonella tobetsuensis
Bacteroides caecigallinarum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides caecigallinarum
Bacteroides finegoldii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides finegoldii
Bacteroides humanifaecis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides humanifaecis
Bacteroides koreensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides koreensis
Bacteroides kribbi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides kribbi
Bacteroides mediterraneensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides mediterraneensis
Bacteroides ovatus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides ovatus
Bacteroides stercoris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides stercoris
Bacteroides uniformis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides uniformis
Bacteroides xylanisolvens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides xylanisolvens
Bacteroides zhangwenhongii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Bacteroides;Bacteroides zhangwenhongii
Phocaeicola barnesiae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola barnesiae
Phocaeicola dorei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola dorei
Phocaeicola faecalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola faecalis
Phocaeicola massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola massiliensis
Phocaeicola plebeius 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola plebeius
Phocaeicola sartorii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola sartorii
Phocaeicola vulgatus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Bacteroidaceae;Phocaeicola;Phocaeicola vulgatus
Barnesiella viscericola 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Barnesiella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Barnesiella;Barnesiella viscericola
Coprobacter fastidiosus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Barnesiellaceae;Coprobacter;Coprobacter fastidiosus
Duncaniella freteri 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Duncaniella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Duncaniella;Duncaniella freteri
Paramuribaculum intestinale 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Paramuribaculum Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Paramuribaculum;Paramuribaculum intestinale
Sodaliphilus pleomorphus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Muribaculaceae;Sodaliphilus;Sodaliphilus pleomorphus
Alloprevotella rava 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella;Alloprevotella rava
Alloprevotella tannerae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Alloprevotella;Alloprevotella tannerae
Hoylesella loescheii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella;Hoylesella loescheii
Hoylesella nanceiensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Hoylesella;Hoylesella nanceiensis
Leyella stercorea 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Leyella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Leyella;Leyella stercorea
Marseilla massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Marseilla Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Marseilla;Marseilla massiliensis
Metaprevotella massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Metaprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Metaprevotella;Metaprevotella massiliensis
Paraprevotella clara 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella;Paraprevotella clara
Paraprevotella xylaniphila 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Paraprevotella;Paraprevotella xylaniphila
Prevotella denticola 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotella;Prevotella denticola
Prevotellamassilia timonensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotellamassilia Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Prevotellamassilia;Prevotellamassilia timonensis
Segatella baroniae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella baroniae
Segatella buccae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella buccae
Segatella copri 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella copri
Segatella maculosa 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella maculosa
Segatella oris 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Prevotellaceae;Segatella;Segatella oris
Parabacteroides distasonis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides distasonis
Parabacteroides johnsonii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides johnsonii
Parabacteroides merdae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Bacteria;Bacteria_none;Bacteroidota;Bacteroidia;Bacteroidales;Tannerellaceae;Parabacteroides;Parabacteroides merdae
Capnocytophaga gingivalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga gingivalis
Capnocytophaga sputigena 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Bacteria;Bacteria_none;Bacteroidota;Flavobacteriia;Flavobacteriales;Flavobacteriaceae;Capnocytophaga;Capnocytophaga sputigena
Campylobacter gracilis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter gracilis
Campylobacter massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter massiliensis
Campylobacter showae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Bacteria;Bacteria_none;Campylobacterota;Epsilonproteobacteria;Campylobacterales;Campylobacteraceae;Campylobacter;Campylobacter showae
Fusobacterium hwasookii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium hwasookii
Fusobacterium massiliense 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium massiliense
Fusobacterium mortiferum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium mortiferum
Fusobacterium polymorphum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium polymorphum
Fusobacterium vincentii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Fusobacteriaceae;Fusobacterium;Fusobacterium vincentii
Leptotrichia massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia;Leptotrichia massiliensis
Leptotrichia trevisanii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Leptotrichia;Leptotrichia trevisanii
Pseudoleptotrichia goodfellowii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia Bacteria;Bacteria_none;Fusobacteriota;Fusobacteriia;Fusobacteriales;Leptotrichiaceae;Pseudoleptotrichia;Pseudoleptotrichia goodfellowii
Lautropia mirabilis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Burkholderiaceae;Lautropia;Lautropia mirabilis
Ottowia beijingensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia;Ottowia beijingensis
Ottowia shaoguanensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Comamonadaceae;Ottowia;Ottowia shaoguanensis
Duodenibacillus massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Duodenibacillus Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Duodenibacillus;Duodenibacillus massiliensis
Sutterella faecalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella;Sutterella faecalis
Sutterella seckii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Burkholderiales;Sutterellaceae;Sutterella;Sutterella seckii
Eikenella corrodens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella corrodens
Eikenella exigua 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella exigua
Eikenella halliae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Eikenella;Eikenella halliae
Kingella bonacorsii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella;Kingella bonacorsii
Kingella kingae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Kingella;Kingella kingae
Neisseria elongata 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria elongata
Neisseria macacae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria macacae
Neisseria mucosa 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria mucosa
Neisseria oralis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria oralis
Neisseria perflava 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Neisseriales;Neisseriaceae;Neisseria;Neisseria perflava
Propionivibrio pelophilus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Propionivibrio Bacteria;Bacteria_none;Pseudomonadota;Betaproteobacteria;Rhodocyclales;Rhodocyclaceae;Propionivibrio;Propionivibrio pelophilus
Anaerobiospirillum succiniciproducens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum;Anaerobiospirillum succiniciproducens
Anaerobiospirillum thomasii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Anaerobiospirillum;Anaerobiospirillum thomasii
Succinatimonas hippei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinatimonas;Succinatimonas hippei
Succinivibrio dextrinosolvens 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinivibrio Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Aeromonadales;Succinivibrionaceae;Succinivibrio;Succinivibrio dextrinosolvens
Cardiobacterium valvarum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Cardiobacteriales;Cardiobacteriaceae;Cardiobacterium;Cardiobacterium valvarum
Enterobacter soli 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Enterobacter;Enterobacter soli
Escherichia albertii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia albertii
Escherichia coli 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia coli
Escherichia fergusonii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia fergusonii
Escherichia marmotae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Escherichia;Escherichia marmotae
Shigella boydii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella boydii
Shigella dysenteriae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella dysenteriae
Shigella flexneri 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella flexneri
Shigella sonnei 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Enterobacteriaceae;Shigella;Shigella sonnei
Pantoea agglomerans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea agglomerans
Pantoea endophytica 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Enterobacterales;Erwiniaceae;Pantoea;Pantoea endophytica
Actinobacillus capsulatus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Actinobacillus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Actinobacillus;Actinobacillus capsulatus
Aggregatibacter actinomycetemcomitans 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter aphrophilus
Aggregatibacter kilianii 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Aggregatibacter;Aggregatibacter kilianii
Bibersteinia trehalosi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bibersteinia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Bibersteinia;Bibersteinia trehalosi
Canicola haemoglobinophilus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Canicola Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Canicola;Canicola haemoglobinophilus
Glaesserella australis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella;Glaesserella australis
Glaesserella parasuis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Glaesserella;Glaesserella parasuis
Haemophilus haemolyticus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus haemolyticus
Haemophilus massiliensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus massiliensis
Haemophilus parahaemolyticus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus parahaemolyticus
Haemophilus pittmaniae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Haemophilus;Haemophilus pittmaniae
Mannheimia glucosida 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia glucosida
Mannheimia granulomatis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia granulomatis
Mannheimia massilioguelmaensis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia massilioguelmaensis
Mannheimia ruminalis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Mannheimia;Mannheimia ruminalis
Pasteurella dagmatis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella dagmatis
Pasteurella multocida 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella multocida
Pasteurella oralis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella oralis
Pasteurella stomatis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurella;Pasteurella stomatis
[Haemophilus] felis 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurellaceae_Incertae_sedis Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis;[Haemophilus] felis
[Pasteurella] aerogenes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurellaceae_Incertae_sedis Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Pasteurellaceae_Incertae_sedis;[Pasteurella] aerogenes
Ursidibacter maritimus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Ursidibacter Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pasteurellales;Pasteurellaceae;Ursidibacter;Ursidibacter maritimus
Pseudomonas bubulae 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas bubulae
Pseudomonas fragi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas fragi
Pseudomonas paraversuta 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Bacteria Bacteria_none Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Bacteria;Bacteria_none;Pseudomonadota;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;Pseudomonas paraversuta
Unknown 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Unclassified Unknown Unknown Unknown Unknown Unknown Unknown Unclassified;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown;Unknown

Alpha Diversity

Sample diversity indices. Indices are calculated from the original abundance table.

Indices GOO-4-DRS-S20 GOO-4-MGE-S21 GRO-36-MGE-S13 GRO-41-MGE-S7 HAM-17-MGE-S5 IRI-16-MGE-S1 JAR-2-MGE-S4 JAR-3-MGE-S19 KOR-58-MGE-S14 KUB-58-MGE-S11 LAM-2-DRS-S16 LAM-2-MGE-S17 MAR-37-MGE-S22 total
Berger Parker index 1.0 0.35 0.84 0.84 0.18 0.5 0.14 0.18 0.38 0.5 1.0 0.5 0.8 0.52
Effective number of species 1.0 9.19 2.35 2.32 7.54 2.83 7.0 20.19 4.46 2.83 1.0 2.0 1.65 9.93
Fisher's alpha 12926.0 37.64 36.34 34.78 25726.0 12926.0 12926.0 38.9 12926.0 12926.0 12926.0 12926.0 12926.0 29.85
Inverse Simpson's index None 1.24 3.5 3.55 1.16 1.6 1.17 1.09 1.33 1.6 None 2.0 3.13 1.4
Pielou's evenness 0.0 0.47 0.19 0.18 0.97 0.95 1.0 0.61 0.93 0.95 0.0 1.0 0.72 0.41
Richness 1.0 113.0 90.0 98.0 8.0 3.0 7.0 135.0 5.0 3.0 1.0 2.0 2.0 256.0
Shannon diversity index 0.0 2.22 0.85 0.84 2.02 1.04 1.95 3.01 1.49 1.04 0.0 0.69 0.5 2.3
Simpson's index 0.0 0.81 0.29 0.28 0.86 0.62 0.86 0.92 0.75 0.62 0.0 0.5 0.32 0.72
Total counts 1.0 33775.0 41664.0 54671.0 11.0 4.0 7.0 28015.0 8.0 4.0 1.0 2.0 5.0 158168.0
Note that the taxon 'Unknown' is considered as a unique taxon.

Sample-based rarefaction curves to display observed taxa richness. Sample size shows the number of reads sampled from the total amount of reads analyzed during the real time analysis. The Y-axis indicates the number of unique taxa at the last analyzed taxonomic rank in those subsampled reads.

Note that Unknown taxon is considered as a unique taxon.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.
This plot includes all the counts (except Unknown), before applying any filter threshold based on abundances.

Alignment Statistics

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_104901.1 1 1515 1 1443 95.2475 0.952475 36.2 0 621 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella boydii 0.9524752475247524 0.21275843197724023 0.22337423731498196 100.0

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_024570.1 1 1450 2 1417 97.7241 1.91586 33.9 1.0 562 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli 1.9158620689655173 0.350108527424039 0.18274203195279212 0.01
1 NR_024841.1 1 1460 37 1446 99.0411 35.4199 34.3 4.89 888807 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sanguinis 35.41986301369863 4.3140122103556555 0.12179641148491205 0.11
2 NR_024842.1 1 1513 3 1467 96.9597 2.85525 31.6 1.0 760570 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus parasanguinis 2.855254461335096 0.5640125852497885 0.1975349633062338 0.01
3 NR_024855.1 1 1485 1 1448 97.5084 0.975084 33.0 27.0 65401 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae Propionivibrio Propionivibrio pelophilus 0.9750841750841751 0.15586861962752063 0.15985145037767137 0.0
4 NR_024896.1 1 1504 10 1461 97.141 9.53324 32.2 1.6 85401 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Mannheimia glucosida 9.533244680851064 1.7351838162861823 0.18201398100811955 0.03
5 NR_024898.1 1 1504 82 1504 100.0 78.1104 33.8 9.56 85403 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Mannheimia ruminalis 78.11037234042553 13.193821042107244 0.16891253551583527 0.24
6 NR_024899.1 1 1504 2 1449 96.3431 1.61702 34.6 4.5 85402 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Mannheimia granulomatis 1.6170212765957446 0.556277195916071 0.34401352905335975 0.01
7 NR_024946.1 1 1458 2 1450 99.4513 1.96845 37.7 5.0 296 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fragi 1.9684499314128945 0.2037856684340618 0.10352595978287878 0.01
8 NR_025073.1 1 1535 1 1437 93.6156 0.936156 35.8 1.0 123822 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae unclassified Pasteurellaceae genus [Haemophilus] felis 0.9361563517915309 0.24447420475768264 0.26114676708632073 0.0
9 NR_025423.1 1 1468 7 1462 99.5913 6.47752 31.1 6.29 249188 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus pittmaniae 6.477520435967302 1.0634688800555785 0.16417839056910183 0.02
10 NR_025569.1 1 1494 10 1464 97.992 9.57965 33.8 3.0 208962 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia albertii 9.579651941097724 1.4875704159161043 0.15528439081740217 0.03
11 NR_025862.1 1 1406 7 1386 98.5775 6.8037 34.3 60.0 46124 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Granulicatella adiacens 6.803698435277383 0.8876506816714589 0.13046590617082074 0.02
12 NR_025863.1 1 1411 49 1411 100.0 47.4422 33.6 59.6 46125 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Aerococcaceae Abiotrophia Abiotrophia defectiva 47.44223954642098 6.47319296485083 0.13644366342606956 0.15
13 NR_025903.1 1 1537 48 1491 97.0072 44.7723 33.4 4.56 1379 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans 44.772283669486015 9.159410166035192 0.20457768546386818 0.14
14 NR_025904.1 1 1536 49 1490 97.0052 46.1699 34.6 2.14 29391 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella morbillorum 46.169921875 9.463700193268126 0.20497544307937224 0.15
15 NR_026032.1 1 1405 20 1387 98.7189 18.9801 33.8 4.1 749 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae unclassified Pasteurellaceae genus [Pasteurella] aerogenes 18.980071174377223 2.6712442610902323 0.1407394227634071 0.06
16 NR_026331.1 1 1488 11939 1488 100.0 11577.4 35.9 12.1 623 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri 11577.415994623656 1459.8243066834982 0.12609241193038365 35.35
17 NR_026332.1 1 1487 25 1474 99.1258 23.8453 33.8 3.12 622 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella dysenteriae 23.8453261600538 3.2970432655788904 0.13826790388391363 0.07
18 NR_026454.1 1 1383 1 1337 96.6739 0.966739 38.4 13.0 137733 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Granulicatella balaenopterae 0.9667389732465654 0.17931740253735123 0.18548688684304918 0.0
19 NR_027549.1 1 1473 676 1473 100.0 641.125 35.0 6.78 585054 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 641.1249151391718 94.82966118576618 0.14791136476919026 2.0
20 NR_028664.1 1 1520 10 1488 97.8947 8.51711 33.6 0.1 28037 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis 8.517105263157895 2.3305120375876216 0.27362724371490693 0.03
21 NR_028682.1 1 1538 3 1470 95.5787 2.8173 34.4 45.0 137732 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Carnobacteriaceae Granulicatella Granulicatella elegans 2.817295188556567 0.6489262652868907 0.23033662497374519 0.01
22 NR_028736.1 1 1544 38 1490 96.5026 35.6367 34.7 59.4 1338 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus intermedius 35.63665803108808 7.569075906262726 0.21239578356813785 0.11
23 NR_028769.1 1 1461 4 1433 98.0835 3.86379 33.5 43.5 109328 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia trevisanii 3.863791923340178 0.5953818351271553 0.1540926237592159 0.01
24 NR_028796.1 1 1491 1 1395 93.5614 0.935614 31.7 28.0 135083 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas noxia 0.9356136820925554 0.2454398500117011 0.2623303343135816 0.0
25 NR_028833.1 1 1512 3 1397 92.3942 2.72421 34.0 1.67 176090 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sinensis 2.7242063492063493 0.8116195056615324 0.2979287915902493 0.01
26 NR_028847.1 1 1493 1 1436 96.1822 0.961822 39.4 57.0 194702 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Cardiobacteriales Cardiobacteriaceae Cardiobacterium Cardiobacterium valvarum 0.9618218352310783 0.19162617906694987 0.1992325106872954 0.0
27 NR_029052.1 1 1510 1 1386 91.7881 0.917881 32.7 1.0 45634 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus cristatus 0.9178807947019868 0.27454624641257835 0.29910882545670514 0.0
28 NR_029171.1 1 1484 9 1451 97.7763 8.67857 34.2 60.0 714 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Aggregatibacter actinomycetemcomitans 8.678571428571429 1.3676269045391172 0.15758663920615343 0.03
30 NR_037086.1 1 1479 3 1438 97.2279 2.88032 34.9 0.0 1559 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tertium 2.8803245436105476 0.5212310830458114 0.180962622494074 0.01
31 NR_040823.1 1 1451 828 1451 100.0 813.453 33.3 9.96 1246 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc lactis 813.4527911784976 27.596026394654164 0.03392455800007048 2.45
32 NR_041590.1 1 1342 1 1265 94.2623 0.942623 34.6 49.0 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 0.9426229508196722 0.23256165506739557 0.24671758189758486 0.0
33 NR_041727.1 1 1505 1 1335 88.7043 0.887043 34.0 1.0 33964 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc citreum 0.8870431893687708 0.31653999678279165 0.3568484607925853 0.0
34 NR_041810.1 1 1364 1 1339 98.1672 0.981672 30.0 2.0 115545 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida 0.9816715542521994 0.13413617641885633 0.1366405859860493 0.0
35 NR_042620.1 1 1415 2 1409 99.576 1.91237 33.5 1.5 434464 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc holzapfelii 1.9123674911660777 0.29737790368555805 0.15550248843867873 0.01
36 NR_042695.1 1 1531 1 1443 94.2521 0.942521 32.1 0.0 501487 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc palmae 0.9425212279555846 0.23275515635251218 0.24694951100186843 0.0
37 NR_042771.1 1 1533 1 1431 93.3464 0.933464 31.6 1.0 889201 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus cristatus 0.9334637964774951 0.24921704825977808 0.2669809468778755 0.0
38 NR_042864.1 1 1362 32 1362 100.0 31.4104 34.7 1.81 717 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Actinobacillus Actinobacillus capsulatus 31.41042584434655 1.4223855251792923 0.04528386632603717 0.09
39 NR_042876.1 1 1362 22 1362 100.0 21.7783 33.7 7.0 985008 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Aggregatibacter aphrophilus 21.77826725403818 0.5466737697325511 0.025101802790632274 0.07
40 NR_042877.1 1 1360 255 1360 100.0 249.648 34.0 6.76 733 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Canicola Canicola haemoglobinophilus 249.64779411764707 14.017538735202644 0.05614925933852573 0.75
41 NR_042879.1 1 1362 32 1362 100.0 31.4317 34.0 4.75 738 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Glaesserella parasuis 31.431718061674008 1.2961452449995166 0.04123685642815561 0.09
42 NR_042883.1 1 1364 1 1345 98.607 0.98607 31.3 1.0 667128 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella dagmatis 0.9860703812316716 0.1171989099322061 0.11885450791637853 0.0
43 NR_042888.1 1 1364 1 1344 98.5337 0.985337 31.3 3.0 760 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella stomatis 0.9853372434017595 0.1201988359643347 0.12198750911856587 0.0
44 NR_042890.1 1 1362 3 1358 99.7063 2.8627 33.7 1.0 47735 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Bibersteinia Bibersteinia trehalosi 2.8627019089574155 0.38826892539209573 0.13563023246576927 0.01
45 NR_042927.1 1 1471 426 1471 100.0 419.717 35.0 1.4 655813 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 419.71719918422843 20.83192189870202 0.049633233851725404 1.26
46 NR_042976.1 1 1482 2 1455 98.1781 1.94467 33.8 1.0 887327 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Kingella kingae 1.9446693657219973 0.2978362002040054 0.15315518691961694 0.01
47 NR_043332.1 1 1497 3 1478 98.7308 2.90247 30.8 0.667 479436 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella parvula 2.9024716098864394 0.42292430366303974 0.14571177965099436 0.01
48 NR_043601.1 1 1339 1 1326 99.0291 0.990291 33.7 1.0 204 Bacteria unclassified Bacteria kingdom Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter showae 0.9902912621359223 0.09805344600351378 0.09901475429766587 0.0
49 NR_044091.1 1 1344 5 1344 100.0 4.92932 31.8 15.8 423477 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella rogosae 4.929315476190476 0.2704231833512426 0.05486018995080302 0.01
50 NR_074902.1 1 1542 6799 1515 98.249 6371.4 36.0 0.904 585054 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 6371.399481193255 1440.884946122838 0.22614889403434246 20.13
51 NR_074980.1 1 1551 22 1485 95.7447 20.7634 33.4 0.0 479436 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella parvula 20.763378465506126 4.460165397010705 0.21480923272772337 0.07
52 NR_104685.1 1 1503 2 1463 97.3387 1.9002 34.8 39.0 539 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Eikenella corrodens 1.9001996007984032 0.3782421963438025 0.19905392895824062 0.01
53 NR_104826.1 1 1530 128 1494 97.6471 119.208 34.8 0.898 624 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei 119.20849673202615 25.263946378764203 0.21193075218082905 0.38
54 NR_104897.1 1 1504 1 1344 89.3617 0.893617 34.2 6.0 47671 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia Lautropia mirabilis 0.8936170212765957 0.3083271648125421 0.34503277967117807 0.0
55 NR_104901.1 1 1515 2242 1488 98.2178 2131.21 35.9 1.89 621 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella boydii 2131.2118811881187 389.55868996615163 0.18278740532779805 6.64
56 NR_104930.1 1 1486 3 1468 98.7887 2.89771 34.6 1.67 726 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus haemolyticus 2.8977119784656797 0.4170428975733887 0.14392144584162925 0.01
58 NR_104944.1 1 1416 23 1384 97.7401 22.1215 34.7 18.6 90367 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria elongata 22.12146892655367 3.522236399602413 0.15922253677170914 0.07
59 NR_108477.1 1 1380 44 1379 99.9275 43.1435 33.7 6.11 701526 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus porcorum 43.143478260869564 2.774572862328186 0.06431036564904592 0.13
60 NR_109720.1 1 1457 35 1457 100.0 32.7515 33.9 6.2 1234680 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus rubneri 32.751544269045986 4.379403580503869 0.13371594159127678 0.1
61 NR_112169.1 1 1460 2 1407 96.3699 1.86986 32.5 1.0 195103 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium perfringens 1.86986301369863 0.43104998645608805 0.23052490118164418 0.01
62 NR_113021.1 1 1476 33 1457 98.7127 31.7514 33.8 50.2 29363 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium paraputrificum 31.751355013550135 5.1975700030201955 0.16369600606972812 0.1
63 NR_113031.1 1 1524 26 1506 98.8189 24.9075 33.6 0.115 29466 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella parvula 24.90748031496063 4.079745978242743 0.16379601335235228 0.08
64 NR_113040.1 1 1480 3 1448 97.8378 2.87973 33.2 2.33 1196653 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium vincentii 2.8797297297297297 0.5137250631101079 0.17839349915602057 0.01
65 NR_113108.1 1 1490 2 1451 97.3826 1.91946 31.9 0.0 840 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Hoylesella loescheii 1.919463087248322 0.3555273712735721 0.1852223018173505 0.01
66 NR_113114.1 1 1489 1 1437 96.5077 0.965077 37.6 47.0 425941 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Hoylesella Hoylesella nanceiensis 0.9650772330423103 0.18358422401096489 0.19022749446926007 0.0
67 NR_113141.1 1 1467 2 1428 97.3415 1.92843 34.5 12.5 393480 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum 1.9284253578732107 0.3458633355568945 0.17935012840649142 0.01
68 NR_113160.1 1 1473 1 1417 96.1982 0.961982 38.6 17.0 157692 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Pseudoleptotrichia Pseudoleptotrichia goodfellowii 0.9619823489477257 0.19123888009696655 0.1987966622320619 0.0
69 NR_113172.1 1 1502 1 1443 96.0719 0.960719 38.0 60.0 1437609 Bacteria unclassified Bacteria kingdom Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium callitrichos 0.9607190412782957 0.19426261864704758 0.20220544227849305 0.0
70 NR_113204.1 1 1474 28 1457 98.8467 26.7612 34.4 15.4 1502 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium perfringens 26.761194029850746 4.245193650541991 0.15863244539113966 0.08
71 NR_113255.1 1 1472 3101 1472 100.0 3049.13 33.5 15.6 935294 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc lactis 3049.1283967391305 48.4506748072447 0.01589000806232363 9.18
72 NR_113260.1 1 1470 160 1470 100.0 155.357 34.7 12.6 1305 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sanguinis 155.35714285714286 7.939888962365503 0.05110733125200783 0.47
73 NR_113325.1 1 1477 1 1409 95.3961 0.953961 31.7 0.0 1559 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium tertium 0.953960731211916 0.20957016609608847 0.21968426921499126 0.0
74 NR_113368.1 1 1475 2 1435 97.2881 1.92814 32.5 2.5 1017 Bacteria unclassified Bacteria kingdom Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Capnocytophaga gingivalis 1.928135593220339 0.34776026505836155 0.18036089696240623 0.01
75 NR_113389.1 1 1414 1 1376 97.3126 0.973126 37.0 1.0 135080 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas flueggei 0.9731258840169731 0.1617154843333126 0.16618146427856395 0.0
76 NR_113564.1 1 1477 1 1424 96.4116 0.964116 32.7 53.0 1019 Bacteria unclassified Bacteria kingdom Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Capnocytophaga Capnocytophaga sputigena 0.964116452268111 0.18599978154305127 0.19292252622126876 0.0
77 NR_113570.1 1 1520 3 1483 97.5658 2.84605 27.2 5.0 1110546 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella tobetsuensis 2.846052631578947 0.5306254476096742 0.18644259832794843 0.01
78 NR_113901.1 1 1426 79 1426 100.0 77.2665 35.9 0.0 1351 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 77.26647966339411 2.5779213779851893 0.03336403300908388 0.23
79 NR_113902.1 1 1426 72 1426 100.0 70.507 35.4 0.0 1351 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 70.5070126227209 2.074764873508702 0.029426361950841022 0.21
80 NR_113903.1 1 1426 1 1399 98.1066 0.981066 30.2 1.0 1352 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecium 0.9810659186535764 0.1362922665083794 0.13892263905714727 0.0
81 NR_114042.1 1 1467 26 1464 99.7955 25.1254 34.3 1.12 562 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli 25.125426039536467 1.5814452435780983 0.06294202697656123 0.08
82 NR_114079.1 1 1467 25 1461 99.591 19.713 35.8 0.16 564 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 19.713019768234492 8.823968926886273 0.4476213705778956 0.07
83 NR_114111.1 1 1466 1 1443 98.4311 0.984311 36.0 16.0 549 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Pantoea agglomerans 0.9843110504774898 0.12426908861575447 0.12624981559992796 0.0
84 NR_114413.1 1 1460 5 1434 98.2192 4.83082 33.6 0.8 655813 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 4.830821917808219 0.7134774063574979 0.14769275673925236 0.01
85 NR_114742.1 1 1533 8 1482 96.6732 7.66667 36.2 14.2 1352 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecium 7.666666666666667 1.4485448682276085 0.1889406349862098 0.02
86 NR_114764.1 1 1466 1 1453 99.1132 0.991132 35.0 5.0 735 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus parahaemolyticus 0.9911323328785812 0.09374983520648271 0.09458861556276921 0.0
87 NR_114782.1 1 1556 1 1466 94.2159 0.942159 34.5 0.0 1351 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 0.9421593830334191 0.2334418128688741 0.247773165637086 0.0
88 NR_115136.1 1 1468 4 1464 99.7275 3.90191 33.2 0.0 123812 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida 3.9019073569482288 0.38876828080286036 0.09963544626721352 0.01
89 NR_115137.1 1 1468 2 1457 99.2507 1.95777 31.6 0.0 747 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida 1.957765667574932 0.23545056723540556 0.12026493830952517 0.01
90 NR_115138.1 1 1468 61 1468 100.0 59.6533 33.2 7.44 115545 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella multocida 59.653269754768395 4.713632781130994 0.07901717375272978 0.18
91 NR_115240.1 1 1469 10 1466 99.7958 9.49081 33.9 0.4 28037 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis 9.490810074880871 0.878270290905726 0.09253902290492838 0.03
92 NR_115241.1 1 1470 9 1470 100.0 8.68163 33.2 0.889 760570 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus parasanguinis 8.681632653061225 0.8654376745078639 0.09968605089535808 0.03
93 NR_115734.1 1 1472 20 1460 99.1848 19.1481 35.1 2.9 1303 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 19.148097826086957 3.077322677262772 0.1607116646892358 0.06
94 NR_115735.1 1 1464 163 1463 99.9317 159.98 34.6 1.84 760570 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus parasanguinis 159.9801912568306 12.053456342455734 0.07534343000693901 0.48
95 NR_115736.1 1 1420 17 1418 99.8592 16.4387 34.4 9.65 888807 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sanguinis 16.4387323943662 1.2901767862021192 0.0784839582061864 0.05
96 NR_115765.1 1 1483 591 1483 100.0 581.97 36.1 25.0 1351 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 581.9696561024949 7.810622403894486 0.013421013143886149 1.75
97 NR_116167.1 1 1506 103 1498 99.4688 98.2271 34.0 17.3 985008 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Aggregatibacter aphrophilus 98.22709163346613 16.711288235489512 0.1701291156807085 0.3
98 NR_116212.1 1 1329 1 1312 98.7208 0.987208 35.2 4.0 888746 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus peroris 0.9872084273890143 0.11237414418416192 0.11383021160118231 0.0
99 NR_117425.1 1 1452 5 1450 99.8623 4.55854 32.3 1.0 684066 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus lactarius 4.558539944903581 0.6813251271200671 0.14946126070076107 0.01
100 NR_117562.1 1 1437 4 1432 99.6521 3.92067 36.1 13.2 357441 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus lactis 3.920668058455115 0.370217035279012 0.0944270287000249 0.01
101 NR_117694.1 1 1514 70 1486 98.1506 66.358 34.0 28.8 33053 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria perflava 66.35799207397622 12.741406519288438 0.1920101275078404 0.21
102 NR_117701.1 1 1514 1 1442 95.2444 0.952444 29.8 12.0 496 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria macacae 0.952443857331572 0.21282517699494222 0.22345167681715847 0.0
103 NR_117717.1 1 1537 1 1442 93.8191 0.938191 34.4 1.0 488 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria mucosa 0.9381912817176318 0.24080780848356842 0.25667240058200047 0.0
104 NR_117719.1 1 1535 1 1437 93.6156 0.936156 31.0 1.0 1458253 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 0.9361563517915309 0.24447420475768283 0.26114676708632095 0.0
105 NR_117842.1 1 1380 1 1317 95.4348 0.954348 33.0 1.0 393480 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum 0.9543478260869566 0.20872961680139387 0.21871440484884094 0.0
106 NR_118234.1 1 1476 10 1453 98.4417 9.3916 35.7 1.0 1282664 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 9.39159891598916 1.3816587539267269 0.14711645655719585 0.03
107 NR_118249.1 1 1463 107 1463 100.0 105.383 34.2 42.9 1107316 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria oralis 105.38345864661655 2.138390375168953 0.020291518257525024 0.32
108 NR_118516.1 1 1435 1 1422 99.0941 0.990941 35.3 60.0 824 Bacteria unclassified Bacteria kingdom Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter gracilis 0.9909407665505227 0.0947478956958151 0.09561408602214815 0.0
109 NR_118526.1 1 1433 2 1433 100.0 1.97976 34.8 6.0 204 Bacteria unclassified Bacteria kingdom Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter showae 1.9797627355198884 0.14081092857613456 0.071125153559958 0.01
110 NR_118750.1 1 1486 2 1457 98.0485 1.91386 29.0 1.0 1071947 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Pasteurella Pasteurella oralis 1.913862718707941 0.3431451670199308 0.17929455632616637 0.01
111 NR_121697.2 1 1513 47 1456 96.2327 43.9372 34.4 16.1 195103 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium perfringens 43.93721083939194 10.231072348214965 0.23285666415225179 0.14
112 NR_125656.1 1 1451 1 1444 99.5176 0.995176 34.6 0.0 1335047 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Ottowia shaoguanensis 0.9951757408683667 0.0692891452932156 0.06962503450170071 0.0
113 NR_133752.1 1 1397 230 1394 99.7853 224.53 35.2 1.39 1179782 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella parahaemolysans 224.52970651395847 18.805564620264672 0.08375535207451748 0.68
114 NR_133753.1 1 1426 27 1424 99.8597 25.7546 33.9 1.44 1179787 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella taiwanensis 25.754558204768582 3.441159921750313 0.13361362654293815 0.08
115 NR_133803.1 1 1492 1 1440 96.5147 0.965147 37.4 0.0 1207057 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Ottowia beijingensis 0.9651474530831099 0.18340623460039765 0.19002923751652312 0.0
116 NR_133981.1 1 1421 1 1400 98.5222 0.985222 36.7 60.0 1329411 Bacteria unclassified Bacteria kingdom Actinomycetota Actinomycetes Bifidobacteriales Bifidobacteriaceae Bifidobacterium Bifidobacterium aesculapii 0.9852216748768473 0.12066451934892339 0.12247448713915723 0.0
117 NR_136472.1 1 1504 1545 1504 100.0 1469.5 35.7 7.66 1499973 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia marmotae 1469.501994680851 241.63997253312303 0.16443664139809677 4.57
118 NR_137345.1 1 1358 2 1340 98.6745 1.94477 33.0 1.0 1331689 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Ursidibacter Ursidibacter maritimus 1.9447717231222386 0.28051325674948135 0.14423968294804834 0.01
119 NR_148589.1 1 1504 617 1493 99.2686 591.749 34.8 26.3 1547447 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oricebi 591.748670212766 92.17354338038382 0.15576468189990592 1.83
120 NR_149208.1 1 1503 53 1503 100.0 50.2987 34.0 24.0 1461579 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Haemophilus Haemophilus massiliensis 50.29873586161011 8.810976777588648 0.17517292684712416 0.16
121 NR_156072.1 1 1509 5 1466 97.1504 4.77601 34.4 2.4 1888195 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus himalayensis 4.776010603048376 0.8776329632470677 0.1837585876980471 0.01
122 NR_165737.1 1 1471 778 1471 100.0 768.666 35.0 2.86 2382163 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus koreensis 768.6662134602311 12.863903798778846 0.016735357393777777 2.3
123 NR_165739.1 1 1454 1 1431 98.4182 0.984182 31.0 39.0 2490855 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum Lachnoanaerobaculum gingivalis 0.984181568088033 0.124772629706252 0.1267780598133406 0.0
124 NR_170431.1 1 1450 1 1432 98.7586 0.987586 33.7 60.0 1795832 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Eikenella halliae 0.9875862068965517 0.11072348822283835 0.11211526391279023 0.0
125 NR_175455.1 1 1513 11 1467 96.9597 9.28883 35.0 0.909 1968889 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus downii 9.288830138797092 2.769246323668942 0.2981264898044051 0.03
126 NR_178362.1 1 1428 1 1411 98.8095 0.988095 34.3 22.0 1216362 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium hwasookii 0.9880952380952381 0.10845754260886058 0.10976425998969022 0.0
127 NR_178515.1 1 1411 320 1411 100.0 311.023 34.8 7.01 1156431 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus ilei 311.0226789510985 13.207316934371502 0.04246416042364571 0.95
128 NR_178843.1 1 1422 1 1363 95.8509 0.958509 34.1 60.0 92488 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Pantoea endophytica 0.9585091420534458 0.19942258310786423 0.20805496198047171 0.0
129 NR_178974.1 1 1431 5 1431 100.0 4.95737 35.1 16.0 2316085 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas bubulae 4.957372466806429 0.21862878768146843 0.044101747275469595 0.01
130 NR_178975.1 1 1431 1 1410 98.5325 0.985325 27.7 1.0 2750624 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas paraversuta 0.9853249475890985 0.1202484729534606 0.12203940765702279 0.0
131 NR_179215.1 1 1533 1 1464 95.499 0.95499 36.3 13.0 1501662 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus parasuis 0.9549902152641878 0.20732559903168774 0.21709709242867303 0.0
132 NR_179383.1 1 1547 924 1542 99.6768 859.345 35.2 2.29 2853160 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus vulneris 859.3451842275372 204.29197211776608 0.2377298155239021 2.74
133 NR_179403.1 1 1528 1 1406 92.0157 0.920157 29.3 1.0 1604354 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Mannheimia Mannheimia massilioguelmaensis 0.9201570680628273 0.2710498813075734 0.2945691455462106 0.0
134 NR_179530.1 1 1469 1 1403 95.5071 0.955071 35.0 18.0 1852365 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium massiliense 0.955071477195371 0.20714717145841882 0.21689179962396096 0.0
135 NR_179541.1 1 1475 1 1408 95.4576 0.954576 36.2 25.0 1852388 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia massiliensis 0.9545762711864407 0.20823163466253503 0.21814038432332325 0.0
136 NR_179592.1 1 1483 2 1481 99.8651 1.9791 32.5 19.0 1936062 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella massiliensis 1.9790964261631827 0.15219674691480764 0.07690213821964556 0.01
137 NR_179979.1 1 1492 9 1488 99.7319 8.64276 33.6 4.0 2094024 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Glaesserella Glaesserella australis 8.642761394101877 1.2961563675444931 0.14997016676047956 0.03
138 NR_180436.1 1 1499 1 1359 90.6604 0.906604 28.1 1.0 2528037 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Eikenella Eikenella exigua 0.9066044029352902 0.29098601257386403 0.3209624965770583 0.0
139 NR_180625.1 1 1433 1 1365 95.2547 0.952547 32.5 7.0 2589786 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus shenyangsis 0.9525471039776692 0.212605547155817 0.22319688576870753 0.0
140 NR_181373.1 1 1507 1 1429 94.8242 0.948242 33.5 1.0 2762557 Bacteria unclassified Bacteria kingdom Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter massiliensis 0.9482415394824154 0.22153898591993684 0.2336313868308921 0.0
141 NR_181569.1 1 1536 4 1454 94.6615 3.73047 34.0 21.0 2796361 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Kingella Kingella bonacorsii 3.73046875 0.9187053782035371 0.2462707610681733 0.01
142 NR_181946.1 1 1474 445 1474 100.0 432.213 33.1 22.1 2025884 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pasteurellales Pasteurellaceae Aggregatibacter Aggregatibacter kilianii 432.21302578019 43.645148517111906 0.10098064128985429 1.32

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025230.1 1 1411 2 1264 89.5819 1.69242 33.3 1.0 187326 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera micronuciformis 1.692416725726435 0.6491060521041957 0.38353795624749587 0.0
1 NR_025514.1 1 1518 110 1510 99.473 104.276 32.8 40.7 158847 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas hypermegale 104.2760210803689 17.97215213645518 0.17235172526005244 0.26
2 NR_025518.1 1 1494 35565 1494 100.0 33202.8 33.6 48.7 179995 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum thomasii 33202.844712182065 7152.613255880791 0.21542170009476658 85.36
3 NR_025796.1 1 1435 1 1307 91.0801 0.910801 34.2 10.0 259063 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna jejuensis 0.910801393728223 0.28503019999808793 0.3129444047415885 0.0
4 NR_026075.1 1 1468 81 1442 98.2289 66.3365 32.9 3.15 13335 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum succiniciproducens 66.33651226158038 21.308518766724863 0.32121855732632415 0.19
5 NR_026100.1 1 1499 8 1448 96.5977 7.52235 33.7 1.25 1286362 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora celerecrescens 7.52234823215477 1.5024998813347086 0.19973814492024902 0.02
6 NR_026314.1 1 1458 1 1414 96.9822 0.969822 28.7 18.0 53443 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hydrogenotrophica 0.9698216735253772 0.1710777457351284 0.17640123994470808 0.0
7 NR_026409.1 1 1495 5 1454 97.2575 4.78796 33.3 4.6 29370 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora sphenoides 4.787959866220736 0.869314602424198 0.1815626335043554 0.01
8 NR_026476.1 1 1463 105 1454 99.3848 91.7785 32.2 1.84 83771 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinivibrio Succinivibrio dextrinosolvens 91.77853725222147 21.960821481834838 0.2392805784372346 0.25
9 NR_026493.1 1 1488 5 1452 97.5806 4.78427 32.9 1.0 69825 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora indolis 4.784274193548387 0.8155709195513897 0.17046910075747548 0.01
10 NR_026494.1 1 1499 1 1414 94.3296 0.943296 30.9 0.0 84030 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora saccharolytica 0.9432955303535691 0.23127704764750995 0.24517984046931923 0.0
11 NR_028862.1 1 1537 19 1513 98.4385 18.2212 33.3 59.4 209880 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Allisonella Allisonella histaminiformans 18.22121014964216 2.965512959115938 0.16275060409059475 0.05
12 NR_029097.1 1 1374 238 1322 96.2154 221.117 32.8 1.72 237576 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium sinus 221.11717612809315 49.301718901474565 0.22296648213757075 0.57
13 NR_029207.1 1 1426 1 1327 93.0575 0.930575 32.1 11.0 907 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 0.9305750350631136 0.25417541025913115 0.273138006804462 0.0
15 NR_037088.1 1 1453 2 1436 98.83 1.94357 34.0 1.5 76122 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella tannerae 1.9435650378527185 0.2768572187039099 0.14244813696061653 0.0
16 NR_040866.1 1 1425 12 1408 98.807 11.6119 32.9 8.5 820 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides uniformis 11.611929824561404 1.5292234453972362 0.13169416871282175 0.03
17 NR_041277.1 1 1490 877 1489 99.9329 837.667 32.7 56.8 484018 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola plebeius 837.6671140939598 137.59381153310807 0.16425834226753994 2.1
18 NR_041313.1 1 1485 4 1456 98.0471 3.80539 31.0 45.8 338188 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides finegoldii 3.8053872053872055 0.6599443412695266 0.17342370320036224 0.01
19 NR_041342.1 1 1488 70 1488 100.0 66.8952 33.4 8.94 823 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 66.89516129032258 10.92753640376942 0.1633531662528521 0.17
20 NR_041343.1 1 1492 27 1492 100.0 25.6548 33.4 49.4 46503 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae 25.654825737265416 4.342819043945185 0.16927883620885167 0.06
21 NR_041351.1 1 1493 63 1455 97.4548 60.0563 32.0 41.2 357276 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola dorei 60.05626255860683 10.081824445809053 0.16787299136323292 0.15
22 NR_041364.1 1 1488 1 1398 93.9516 0.939516 32.7 1.0 1002367 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Leyella Leyella stercorea 0.9395161290322581 0.23838114925576645 0.2537275751735196 0.0
23 NR_041446.1 1 1456 3 1435 98.5577 2.87912 32.6 3.67 376804 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola barnesiae 2.879120879120879 0.448383294509094 0.15573618244399828 0.01
24 NR_041590.1 1 1342 211 1293 96.3487 196.903 33.5 9.34 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 196.90312965722802 42.81444912980552 0.21743914992279487 0.51
25 NR_041627.1 1 1481 1 1397 94.3282 0.943282 33.2 0.0 762982 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella xylaniphila 0.9432815665091154 0.23130381058950059 0.24521184214964237 0.0
26 NR_042152.1 1 1456 2 1412 96.978 1.69505 32.4 0.5 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 1.695054945054945 0.5219129514096852 0.30790326468902013 0.0
27 NR_042745.1 1 1493 5 1452 97.2539 4.7937 32.5 0.0 204516 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola massiliensis 4.793703951774949 0.8491202717313729 0.17713239705113035 0.01
28 NR_043224.1 1 1455 11 1449 99.5876 10.5203 33.4 0.0 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 10.520274914089347 1.5244066819528244 0.14490179148372376 0.03
29 NR_043657.1 1 1553 35 1512 97.3599 31.9259 32.1 11.1 349095 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera paucivorans 31.92594977462975 7.2393752431541145 0.22675520365902946 0.08
30 NR_044270.1 1 1454 1 1196 82.2558 0.822558 29.7 0.0 439703 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella maculosa 0.8225584594222833 0.3820419352049235 0.4644556637023067 0.0
31 NR_044473.1 1 1399 3 1395 99.7141 2.80986 33.2 1.0 491921 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas rupellensis 2.809864188706219 0.4256130206110812 0.15147102921264374 0.01
32 NR_044490.1 1 1482 17 1450 97.8408 16.2443 33.3 54.0 501571 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Butyricicoccus pullicaecorum 16.244264507422404 2.6288106135240557 0.1618300793072464 0.04
33 NR_074376.1 1 1497 4 1470 98.1964 3.80294 32.8 0.25 435591 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 3.802939211756847 0.7025419384844543 0.18473656805045285 0.01
34 NR_074515.1 1 1510 71 1450 96.0265 66.3834 32.0 28.6 435590 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 66.38344370860928 13.721279121264624 0.20669730816458246 0.17
35 NR_074902.1 1 1542 2 1460 94.6822 1.86252 35.4 0.0 585054 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 1.8625162127107653 0.47427563519731514 0.2546424197333774 0.0
36 NR_102980.1 1 1552 121 1506 97.0361 112.762 34.1 1.95 1064535 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 112.76224226804123 24.490178804141593 0.21718421265450955 0.29
37 NR_104803.1 1 1521 2 1453 95.5293 1.87771 33.1 4.5 39482 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena contorta 1.8777120315581854 0.4435633887752861 0.236225460198603 0.0
38 NR_112143.1 1 1397 4 1378 98.6399 3.53686 33.7 24.0 821 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 3.5368647100930564 0.6647648372043005 0.18795314259753243 0.01
39 NR_112901.1 1 1469 13 1439 97.9578 12.5078 32.0 0.0 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 12.50782845473111 1.9899611862165727 0.1590972560439831 0.03
40 NR_112938.1 1 1478 6 1452 98.2409 5.62652 31.1 0.0 204516 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola massiliensis 5.626522327469553 0.8987437950699437 0.15973344505932863 0.01
41 NR_112943.1 1 1476 16 1476 100.0 15.4885 32.4 57.6 449673 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides stercoris 15.488482384823849 2.0536180315086394 0.13259000982051317 0.04
42 NR_112945.1 1 1477 59 1471 99.5938 56.9966 32.7 41.4 820 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides uniformis 56.99661475964793 7.930597016691921 0.13914154463620126 0.14
43 NR_112946.1 1 1489 22 1451 97.448 20.9288 33.3 1.55 821 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 20.928811282740092 3.7537045946632874 0.17935584319396833 0.05
44 NR_112947.1 1 1465 1 1432 97.7474 0.977474 31.3 1.0 657309 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides xylanisolvens 0.9774744027303754 0.1483852915125724 0.15180478496223362 0.0
45 NR_113015.1 1 1490 3 1444 96.9128 2.67383 32.7 0.667 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 2.6738255033557046 0.6723090505740718 0.25144088487835514 0.01
46 NR_113064.1 1 1490 76 1471 98.7248 71.7987 33.5 0.987 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 71.79865771812081 13.758892117181414 0.19163160641802493 0.18
47 NR_113077.1 1 1480 18 1454 98.2432 17.3966 31.3 41.6 454154 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella clara 17.396621621621623 2.435961310341039 0.1400249636580859 0.04
48 NR_113094.1 1 1494 16 1486 99.4645 14.9029 32.3 1.62 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 14.902945113788487 3.054275542693519 0.20494442671386112 0.04
49 NR_113097.1 1 1480 9 1445 97.6351 8.20068 31.6 11.8 873513 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella buccae 8.200675675675676 1.6504297811119668 0.20125534119186875 0.02
50 NR_113101.1 1 1492 1 1369 91.756 0.91756 25.7 0.0 28129 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella denticola 0.9175603217158177 0.2750334120222132 0.2997442299029526 0.0
51 NR_113110.1 1 1405 1 1202 85.5516 0.855516 30.5 1.0 439703 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella maculosa 0.8555160142348754 0.3515798111703049 0.41095643485380895 0.0
52 NR_113118.1 1 1481 1 1426 96.2863 0.962863 32.9 0.0 28135 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella oris 0.962862930452397 0.18909761398023806 0.19639100021369746 0.0
53 NR_113164.1 1 1466 1 1396 95.2251 0.952251 32.8 1.0 147206 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella stercoris 0.9522510231923602 0.21323464076332227 0.2239269221769559 0.0
54 NR_113165.1 1 1466 4 1427 97.3397 3.79809 31.9 8.0 147207 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella intestinalis 3.7980900409276943 0.7028662096537183 0.18505780591816648 0.01
55 NR_113195.1 1 1490 28 1469 98.5906 26.4826 32.6 1.64 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 26.48255033557047 4.969034740013935 0.18763429794522832 0.07
56 NR_113231.1 1 1491 27 1452 97.3843 25.7632 32.7 19.2 536633 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia glucerasea 25.763246143527834 4.335171607867621 0.16826961880953384 0.06
57 NR_113273.1 1 1469 1 1407 95.7794 0.957794 32.7 0.0 742742 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella tanakaei 0.9577944179714091 0.2010578794134125 0.2099175727493269 0.0
58 NR_113274.1 1 1478 16 1437 97.226 15.2977 34.3 0.0625 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 15.297699594046009 2.7299536517822784 0.17845517458355628 0.04
59 NR_113410.1 1 1390 12 1377 99.0647 11.7338 35.2 4.58 208479 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster bolteae 11.733812949640289 1.3187935383018963 0.11239258235681396 0.03
60 NR_113411.1 1 1493 21 1479 99.0623 20.2297 34.1 43.3 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 20.229738780977897 3.258067384169406 0.16105335908899523 0.05
61 NR_114789.1 1 1505 3 1371 91.0963 2.68904 32.7 8.67 1535 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Oscillospiraceae unclassified Oscillospiraceae genus [Clostridium] leptum 2.6890365448504983 0.8682166022554025 0.32287274188148773 0.01
62 NR_114807.1 1 1456 2 1428 98.0769 1.87019 28.9 0.5 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 1.8701923076923077 0.3891261926251968 0.20806747574817722 0.0
63 NR_115211.1 1 1485 8 1453 97.8451 7.68418 33.7 0.875 253257 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora amygdalina 7.684175084175084 1.2506908836787944 0.16276189310866793 0.02
64 NR_116860.1 1 1455 14 1453 99.8625 13.1086 31.7 0.0 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 13.108591065292096 1.8657415377520257 0.14232967741987088 0.03
65 NR_117126.1 1 1525 2 1448 94.9508 1.85508 34.2 1.0 1544 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena orotica 1.8550819672131147 0.4742366530725382 0.2556418861561049 0.0
66 NR_118128.1 1 1310 1 1239 94.5802 0.945802 33.3 7.0 1531 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster clostridioformis 0.9458015267175572 0.2264089193832586 0.23938311896050748 0.0
67 NR_118316.1 1 1490 47 1487 99.7987 44.6067 33.9 53.4 1349822 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter Coprobacter fastidiosus 44.60671140939597 7.399869982800664 0.1658914039837053 0.11
68 NR_119085.1 1 1503 1 1400 93.147 0.93147 31.2 1.0 29364 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium [Clostridium] polysaccharolyticum 0.9314703925482368 0.2526525288895205 0.27124053637210666 0.0
69 NR_125570.1 1 1395 224 1367 97.9928 205.478 33.2 1.38 796943 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium parvum 205.47813620071685 52.84610837819379 0.25718604108114074 0.54
70 NR_125571.1 1 1436 37 1434 99.8607 34.8517 32.8 10.1 796944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium asaccharolyticum 34.8516713091922 4.761542637956418 0.13662307886797243 0.09
71 NR_133027.1 1 1519 64 1505 99.0783 61.2047 34.0 1.27 1232428 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera massiliensis 61.204739960500326 10.22309812474293 0.16703115038705507 0.15
72 NR_133762.1 1 1409 1 1331 94.4642 0.944642 33.0 1.0 1096246 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Hungatella effluvii 0.9446415897799858 0.2286785006027584 0.24207964489052336 0.0
73 NR_134080.1 1 1566 63 1530 97.7011 58.7625 33.8 1.67 879612 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera indica 58.76245210727969 13.85321776766882 0.23574948408173452 0.15
74 NR_144727.1 1 1478 1 1406 95.1286 0.951286 34.8 8.0 1673717 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Acutalibacteraceae Anaeromassilibacillus Anaeromassilibacillus senegalensis 0.9512855209742895 0.2152704776762553 0.22629428592141204 0.0
75 NR_144744.1 1 1491 29 1448 97.116 27.1127 33.2 8.66 1841856 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides mediterraneensis 27.112676056338028 5.331975247686527 0.19665986627830828 0.07
76 NR_144746.1 1 1494 1 1137 76.1044 0.761044 30.4 52.0 1841864 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Marseilla Marseilla massiliensis 0.7610441767068273 0.4264457032348363 0.5603429029312625 0.0
77 NR_144750.1 1 1493 242 1475 98.7944 226.38 32.6 43.8 1852370 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotellamassilia Prevotellamassilia timonensis 226.38044206296047 46.75648325808168 0.2065394114085079 0.58
78 NR_147373.1 1 1532 1 1461 95.3655 0.953655 35.3 1.0 1852379 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Colibacter Colibacter massiliensis 0.9536553524804178 0.21023040019432898 0.22044693572738672 0.0
79 NR_147377.1 1 1496 1 1404 93.8503 0.938503 33.9 1.0 1870999 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Metaprevotella Metaprevotella massiliensis 0.9385026737967914 0.24024030692842507 0.2559825492627663 0.0
80 NR_147381.1 1 1497 23 1477 98.664 21.8651 33.6 60.0 1852381 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Duodenibacillus Duodenibacillus massiliensis 21.86506346025384 3.68958732858994 0.16874349966085606 0.06
81 NR_156078.1 1 1412 1 1351 95.6799 0.956799 29.0 0.0 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 0.9567988668555241 0.20330960439563034 0.2124893866814434 0.0
82 NR_159117.1 1 1417 1 1398 98.6591 0.986591 34.2 1.0 1912896 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides koreensis 0.9865913902611151 0.11501660281783362 0.1165797755313807 0.0
83 NR_169348.1 1 1367 12 1359 99.4148 11.6284 34.8 17.5 2584944 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella faecalis 11.628383321141184 1.1168781365328948 0.09604758509313459 0.03
84 NR_173691.1 1 1434 1 1420 99.0237 0.990237 34.8 4.0 1871031 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Thermophilibacter Thermophilibacter mediterraneus 0.9902370990237099 0.09832388692895241 0.0992932773634632 0.0
85 NR_179173.1 1 1401 7 1393 99.429 6.77159 30.9 8.0 2126740 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium fessum 6.771591720199857 0.7301546923129432 0.10782615409828539 0.02
86 NR_179270.1 1 1482 2438 1482 100.0 2377.15 33.3 59.8 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 2377.150472334683 100.71349190919477 0.04236731880514089 5.85
87 NR_179545.1 1 1471 2 1429 97.1448 1.92386 37.1 22.0 1870987 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella vaginalis 1.9238613188307274 0.356995228646029 0.18556183086159317 0.0
88 NR_179587.1 1 1453 3 1453 100.0 2.94976 35.5 1.0 1926283 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Lachnoclostridium edouardi 2.9497591190640056 0.22465453434454322 0.07616029827406003 0.01
89 NR_179599.1 1 1429 1 1405 98.3205 0.983205 34.7 0.0 1937461 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella provencensis 0.9832050384884534 0.1285024932807624 0.13069755366420605 0.0
90 NR_179604.1 1 1455 67 1455 100.0 65.644 34.4 45.3 1944635 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella seckii 65.64398625429553 1.9582559179946166 0.02983145950961311 0.16
91 NR_179646.1 1 1556 1 1458 93.7018 0.937018 36.8 15.0 2045301 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera vaginalis (ex Bordigoni et al. 2020) 0.9370179948586118 0.2429305912596393 0.2592592592592584 0.0
92 NR_179932.1 1 1396 48 1391 99.6418 46.1003 33.5 5.5 2144175 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera stantonii 46.10028653295129 4.39098776551104 0.09524860029606272 0.12
93 NR_179976.1 1 1379 3 1326 96.1566 2.58303 30.4 1.0 2094151 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Paramuribaculum Paramuribaculum intestinale 2.5830311820159535 0.8191166511692688 0.3171145036390853 0.01
94 NR_180797.1 1 1468 46 1468 100.0 44.1662 34.8 25.3 2605778 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium porci 44.166212534059945 5.884876713957601 0.13324386168316613 0.11
95 NR_180820.1 1 1475 7 1458 98.8475 6.32407 32.6 8.57 2606632 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Porcincola Porcincola intestinalis 6.324067796610169 1.3941999937320138 0.22045936864866214 0.02
96 NR_180822.1 1 1501 16 1473 98.1346 14.6282 32.9 3.31 2606636 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Bilifractor Bilifractor porci 14.628247834776815 3.4839082149559246 0.23816305645802446 0.04
97 NR_180830.1 1 1459 1 1386 94.9966 0.949966 27.8 18.0 2606626 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Sodaliphilus pleomorphus 0.9499657299520219 0.21801569179475086 0.22949848075652346 0.0
98 NR_180833.1 1 1470 11 1458 99.1837 10.4721 33.2 5.82 2606635 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Waltera Waltera intestinalis 10.472108843537415 1.7582374566990115 0.1678971717128457 0.03
99 NR_181358.1 1 1404 6 1389 98.9316 5.84046 34.2 14.3 2788944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena absiana 5.84045584045584 0.7021852887051045 0.12022782260267888 0.01
100 NR_181397.1 1 1401 1 1297 92.5767 0.925767 36.7 1.0 2763671 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Jingyaoa Jingyaoa shaoxingensis 0.9257673090649536 0.2621491913616917 0.2831696353876099 0.0
101 NR_181398.1 1 1390 135 1339 96.3309 125.306 33.5 14.1 2763667 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Wansuia Wansuia hejianensis 125.30575539568345 29.09215145409388 0.23216931546542555 0.32
102 NR_181532.1 1 1419 43 1419 100.0 42.0564 33.5 49.3 2792859 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides humanifaecis 42.056377730796335 2.36570067058709 0.05625069961397971 0.1
103 NR_181885.1 1 1463 4 1460 99.7949 3.86261 33.0 2.0 2885351 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Hominisplanchenecus Hominisplanchenecus faecis 3.862611073137389 0.5011162015995279 0.12973509165459374 0.01

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025230.1 1 1411 5 1406 99.6456 4.68391 32.8 1.0 187326 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera micronuciformis 4.683912119064494 0.8026465812832162 0.17136243398254167 0.01
1 NR_025514.1 1 1518 242 1508 99.3412 228.93 32.4 36.7 158847 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas hypermegale 228.92951251646903 39.124151717173994 0.1709004282021499 0.44
2 NR_025518.1 1 1494 46626 1494 100.0 43619.8 33.7 49.2 179995 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum thomasii 43619.83400267737 9390.743292781399 0.21528608504573854 85.28
3 NR_025567.1 1 1498 1 1443 96.3284 0.963284 34.4 0.0 208479 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster bolteae 0.9632843791722296 0.18806271298426405 0.19523073045767675 0.0
4 NR_025796.1 1 1435 5 1358 94.6341 4.36934 31.1 8.4 259063 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna jejuensis 4.369337979094077 1.2416272539238535 0.2841682790080909 0.01
5 NR_025981.1 1 1477 2 1407 95.2607 1.84428 32.7 5.5 831 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio fibrisolvens 1.8442789438050102 0.47566662560067396 0.25791468649493227 0.0
6 NR_026075.1 1 1468 78 1421 96.7984 65.7146 32.3 2.01 13335 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum succiniciproducens 65.71457765667574 20.628368076711507 0.3139085544227938 0.14
7 NR_026100.1 1 1499 14 1468 97.932 13.1861 33.9 2.36 1286362 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora celerecrescens 13.186124082721815 2.4933629552269507 0.18908990538729126 0.03
8 NR_026409.1 1 1495 12 1474 98.5953 11.5171 33.4 2.0 29370 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora sphenoides 11.51705685618729 1.9356391787242255 0.1680671722727795 0.02
9 NR_026476.1 1 1463 120 1461 99.8633 108.424 31.7 2.55 83771 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinivibrio Succinivibrio dextrinosolvens 108.42447026657553 22.345748370602344 0.20609506613832138 0.22
10 NR_026493.1 1 1488 9 1473 98.9919 8.63642 32.2 5.44 69825 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora indolis 8.636424731182796 1.3229533238261963 0.153182985437194 0.02
11 NR_028862.1 1 1537 31 1530 99.5446 29.352 33.5 59.2 209880 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Allisonella Allisonella histaminiformans 29.351984385165906 4.9601257439689 0.1689877481154453 0.06
12 NR_029097.1 1 1374 281 1328 96.6521 261.539 32.8 1.8 237576 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium sinus 261.53930131004364 57.59334792051752 0.22020915262843452 0.51
13 NR_037088.1 1 1453 4 1441 99.1741 3.88094 34.1 1.0 76122 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella tannerae 3.88093599449415 0.4924774281512378 0.1268965602241086 0.01
14 NR_040866.1 1 1425 2 1406 98.6667 1.88912 34.4 14.5 820 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides uniformis 1.8891228070175439 0.35390691957836845 0.18733928692391347 0.0
15 NR_040877.1 1 1494 1 1421 95.1138 0.951138 29.7 1.0 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 0.9511378848728246 0.21557970412929564 0.2266545235532496 0.0
16 NR_041277.1 1 1490 411 1489 99.9329 392.974 32.8 57.2 484018 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola plebeius 392.9744966442953 63.57559064151727 0.16178044932789454 0.75
17 NR_041313.1 1 1485 3 1446 97.3737 2.87879 33.3 18.0 338188 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides finegoldii 2.878787878787879 0.5152109294317596 0.17896800706576912 0.01
18 NR_041342.1 1 1488 58 1487 99.9328 55.668 33.1 8.29 823 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 55.668010752688176 8.91612640227757 0.16016606811923875 0.11
19 NR_041343.1 1 1492 34 1474 98.7936 32.122 34.0 50.4 46503 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae 32.12198391420912 5.6315488495423285 0.17531759135995395 0.06
20 NR_041351.1 1 1493 30 1475 98.7944 28.7502 31.9 40.9 357276 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola dorei 28.75016744809109 4.635965031544411 0.1612500184534481 0.05
21 NR_041446.1 1 1456 2 1435 98.5577 1.87431 26.1 6.5 376804 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola barnesiae 1.8743131868131868 0.3724725386171557 0.19872481356781924 0.0
22 NR_041590.1 1 1342 441 1313 97.839 412.803 33.7 9.07 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 412.8025335320417 89.33950663142282 0.21642189515411075 0.81
23 NR_042152.1 1 1456 5 1439 98.8324 4.2603 30.9 0.2 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 4.260302197802198 1.251467673273233 0.2937509160544619 0.01
24 NR_042745.1 1 1493 6 1452 97.2539 5.71869 31.2 0.0 204516 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola massiliensis 5.718687206965841 1.0247599908262217 0.17919497145743135 0.01
25 NR_042927.1 1 1471 2 1468 99.7961 1.96873 32.3 1.0 655813 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus oralis 1.9687287559483344 0.18539744137099054 0.09417114511627317 0.0
26 NR_043224.1 1 1455 9 1452 99.7938 8.42543 32.1 0.0 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 8.425429553264605 1.2289908990375267 0.1458668535850886 0.02
27 NR_043657.1 1 1553 81 1513 97.4243 74.4874 33.6 11.8 349095 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera paucivorans 74.48744365743721 16.685608567237256 0.22400565448283147 0.15
28 NR_043681.1 1 1420 1 1391 97.9577 0.979577 35.6 1.0 358743 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster citroniae 0.9795774647887324 0.14144064220305233 0.14438944063863 0.0
29 NR_044473.1 1 1399 3 1394 99.6426 2.82559 33.5 2.0 491921 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas rupellensis 2.825589706933524 0.4763483090909653 0.16858367933677218 0.01
30 NR_044490.1 1 1482 25 1467 98.9879 24.1113 34.2 50.9 501571 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Butyricicoccaceae Butyricicoccus Butyricicoccus pullicaecorum 24.111336032388664 3.8163500055439394 0.15828032094187777 0.05
31 NR_074376.1 1 1497 5 1468 98.0628 4.78824 33.2 0.2 435591 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 4.788243152972612 0.8123434351973893 0.16965375592780296 0.01
32 NR_074515.1 1 1510 97 1490 98.6755 91.5536 32.8 28.9 435590 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 91.55364238410596 18.669611866957442 0.203919924765315 0.18
33 NR_102893.1 1 1537 2 1433 93.2336 1.71243 29.0 1.0 43305 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio proteoclasticus 1.7124268054651919 0.5832695898586601 0.340609939062599 0.0
34 NR_102980.1 1 1552 255 1526 98.3247 238.738 34.0 1.55 1064535 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 238.73775773195877 51.89382665073728 0.217367487839945 0.47
35 NR_104735.1 1 1511 1 1233 81.6016 0.816016 35.2 4.0 45851 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio crossotus 0.8160158835208471 0.3874712394004731 0.47483296247697887 0.0
36 NR_104803.1 1 1521 13 1486 97.6989 12.2939 35.0 3.23 39482 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena contorta 12.293885601577909 2.608290168725467 0.2121615779791131 0.02
37 NR_104899.1 1 1480 7 1443 97.5 6.66757 32.7 2.0 384636 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora xylanisolvens 6.667567567567567 1.205965813251746 0.1808704300377568 0.01
38 NR_112143.1 1 1397 11 1397 100.0 10.718 33.0 11.3 821 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 10.717967072297782 0.9620125596820064 0.08975699898989933 0.02
39 NR_112899.1 1 1491 2 1429 95.8417 1.87928 28.0 0.0 742742 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella tanakaei 1.8792756539235413 0.43510417025273473 0.23152759380686205 0.0
40 NR_112901.1 1 1469 15 1455 99.047 14.2948 33.3 0.4 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 14.294758339006126 2.285207058379327 0.15986328724030818 0.03
41 NR_112938.1 1 1478 3 1452 98.2409 2.90122 32.0 0.0 204516 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola massiliensis 2.901217861975643 0.4426346632310555 0.15256857095510729 0.01
42 NR_112943.1 1 1476 6 1449 98.1707 5.81504 33.7 60.0 449673 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides stercoris 5.815040650406504 0.8420302674175513 0.1448021291749162 0.01
43 NR_112945.1 1 1477 7 1466 99.2552 6.78199 32.4 46.4 820 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides uniformis 6.781990521327014 0.9206136085756698 0.13574386541542022 0.01
44 NR_112946.1 1 1489 24 1466 98.4553 22.7636 33.6 0.667 821 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 22.763599731363332 4.173760104345126 0.18335237632010304 0.04
45 NR_112947.1 1 1465 1 1425 97.2696 0.972696 29.1 37.0 657309 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides xylanisolvens 0.9726962457337884 0.1629670496425038 0.16754156331667935 0.0
46 NR_113015.1 1 1490 4 1440 96.6443 3.77047 33.8 0.75 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 3.770469798657718 0.7847115791873464 0.2081203725505778 0.01
47 NR_113064.1 1 1490 57 1478 99.1946 53.9409 34.1 0.965 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 53.940939597315435 10.540519538300373 0.1954085267514502 0.1
48 NR_113077.1 1 1480 2 1453 98.1757 1.9473 33.1 41.0 454154 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella clara 1.9472972972972973 0.29395852482454 0.15095718832072144 0.0
49 NR_113094.1 1 1494 10 1448 96.921 9.27041 33.0 1.1 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 9.27041499330656 2.034960890312905 0.21951130470234514 0.02
50 NR_113097.1 1 1480 5 1435 96.9595 4.58514 34.2 10.6 873513 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella buccae 4.585135135135135 0.9881982556902829 0.21552216599198623 0.01
51 NR_113164.1 1 1466 1 1413 96.3847 0.963847 34.6 1.0 147206 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella stercoris 0.9638472032742156 0.18667022262452215 0.19367200733726078 0.0
52 NR_113165.1 1 1466 2 1427 97.3397 1.90041 33.6 20.0 147207 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella intestinalis 1.9004092769440655 0.3779926105966149 0.19890063429096821 0.0
53 NR_113195.1 1 1490 24 1450 97.3154 22.806 33.4 1.46 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 22.806040268456375 4.337362700191121 0.19018482161457198 0.04
54 NR_113231.1 1 1491 69 1485 99.5976 65.4534 33.8 18.1 536633 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia glucerasea 65.45338698859825 11.158257654330189 0.1704763980552132 0.13
55 NR_113274.1 1 1478 21 1459 98.7145 20.0392 32.6 0.0952 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 20.039242219215154 3.514104958765672 0.17536116986480058 0.04
56 NR_113359.1 1 1511 1 1391 92.0582 0.920582 33.7 0.0 1527 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna aminovalerica 0.9205823957643945 0.27038943835342694 0.29371563001583617 0.0
57 NR_113410.1 1 1390 63 1383 99.4964 61.3892 33.6 2.75 208479 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster bolteae 61.389208633093524 6.796340431337336 0.11070904125767772 0.12
58 NR_113411.1 1 1493 97 1493 100.0 92.2485 32.5 40.0 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 92.24849296718017 14.903008797054305 0.16155287005454325 0.18
59 NR_114789.1 1 1505 8 1372 91.1628 7.18007 32.5 5.75 1535 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Oscillospiraceae unclassified Oscillospiraceae genus [Clostridium] leptum 7.1800664451827245 2.271329610947104 0.31633824398254595 0.01
60 NR_114807.1 1 1456 6 1440 98.9011 5.20192 30.6 0.333 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 5.201923076923077 1.4278996465705314 0.2744945716142981 0.01
61 NR_115211.1 1 1485 10 1453 97.8451 9.38788 30.8 0.9 253257 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora amygdalina 9.387878787878789 1.6641560521114007 0.17726646132884513 0.02
62 NR_116747.1 1 1404 1 1304 92.8775 0.928775 27.4 1.0 1298596 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Mediterraneibacter faecis 0.9287749287749287 0.25720042856506864 0.2769243878108561 0.0
63 NR_116860.1 1 1455 15 1453 99.8625 14.3773 31.8 3.6 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 14.377319587628866 1.9278839327099893 0.13409202744361748 0.03
64 NR_117126.1 1 1525 1 1441 94.4918 0.944918 36.2 1.0 1544 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena orotica 0.9449180327868852 0.228140185195524 0.24143912728880923 0.0
65 NR_117373.1 1 1327 2 1269 95.6292 1.86436 34.9 1.0 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 1.8643556895252449 0.45239380391041806 0.24265423516132772 0.0
66 NR_117547.1 1 1535 1 1446 94.202 0.94202 32.9 1.0 1354262 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter soli 0.9420195439739414 0.2337064884530784 0.2480909127077976 0.0
67 NR_117867.1 1 1372 1 1258 91.691 0.91691 31.8 1.0 871664 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia stercoris 0.9169096209912536 0.276018781833646 0.30103161261984285 0.0
68 NR_118128.1 1 1310 12 1306 99.6947 11.4656 32.5 4.25 1531 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster clostridioformis 11.465648854961833 1.446225463210203 0.1261355097739924 0.02
69 NR_118316.1 1 1490 28 1471 98.7248 26.2228 33.0 51.8 1349822 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Coprobacter Coprobacter fastidiosus 26.22281879194631 4.402716074531184 0.16789636954984294 0.05
70 NR_118334.1 1 1455 1 1415 97.2509 0.972509 30.4 1.0 671218 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella rava 0.9725085910652921 0.1635103402525129 0.16813254068367936 0.0
71 NR_119085.1 1 1503 1 1350 89.8204 0.898204 28.0 4.0 29364 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium [Clostridium] polysaccharolyticum 0.8982035928143712 0.30238038737611145 0.33665016461207076 0.0
72 NR_125570.1 1 1395 324 1366 97.9211 298.031 33.0 1.32 796943 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium parvum 298.03082437275987 75.25027143428329 0.25249157228167973 0.59
73 NR_125571.1 1 1436 43 1434 99.8607 40.5376 31.6 10.2 796944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium asaccharolyticum 40.53760445682451 5.327372512087252 0.13141803970585608 0.08
74 NR_133027.1 1 1519 127 1519 100.0 121.434 34.2 1.29 1232428 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera massiliensis 121.43383805134957 20.535123825999996 0.16910544997611376 0.23
75 NR_134080.1 1 1566 128 1513 96.6156 119.455 34.1 1.46 879612 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera indica 119.45466155810983 28.264535371227193 0.23661307982926766 0.23
76 NR_134772.1 1 1433 1 1337 93.3008 0.933008 32.9 1.0 1337051 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Murimonas Murimonas intestini 0.9330076762037683 0.2500087045456866 0.26795996530588545 0.0
77 NR_144727.1 1 1478 1 1423 96.2788 0.962788 36.0 1.0 1673717 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Acutalibacteraceae Anaeromassilibacillus Anaeromassilibacillus senegalensis 0.9627875507442489 0.18928201942112552 0.19659790913873754 0.0
78 NR_144744.1 1 1491 26 1489 99.8659 24.5661 32.4 6.42 1841856 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides mediterraneensis 24.566063044936286 4.564923477068544 0.18582234641010154 0.05
79 NR_144746.1 1 1494 2 1427 95.5154 1.6178 30.9 25.0 1841864 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Marseilla Marseilla massiliensis 1.6178045515394912 0.5708013571960753 0.3528246701079588 0.0
80 NR_144750.1 1 1493 146 1492 99.933 136.723 32.7 43.7 1852370 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotellamassilia Prevotellamassilia timonensis 136.72337575351642 28.414178537954275 0.2078223886834032 0.27
81 NR_147373.1 1 1532 2 1482 96.7363 1.90013 32.3 2.5 1852379 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Colibacter Colibacter massiliensis 1.900130548302872 0.3939158485652426 0.20730988663756497 0.0
82 NR_147381.1 1 1497 80 1496 99.9332 76.4442 34.2 60.0 1852381 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Duodenibacillus Duodenibacillus massiliensis 76.4442217768871 12.76229396726386 0.16694909923358703 0.15
83 NR_147396.1 1 1453 3 1442 99.2429 2.94494 33.7 1.0 1917870 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster hominis (ex Hitch et al. 2024) 2.9449415003441155 0.3272393022352469 0.11111911805277255 0.01
84 NR_156078.1 1 1412 1 1353 95.8215 0.958215 30.1 0.0 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 0.9582152974504249 0.20009682951615793 0.20882241188234665 0.0
85 NR_156079.1 1 1412 2 1378 97.5921 1.90297 32.2 0.5 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 1.9029745042492918 0.3684700654757034 0.19362848249039566 0.0
86 NR_156907.1 1 1492 1 1417 94.9732 0.949732 28.0 1.0 1912855 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalimonas Faecalimonas umbilicata 0.9497319034852547 0.2184976315375759 0.2300624320776734 0.0
87 NR_163635.1 1 1454 1 1409 96.9051 0.969051 30.7 1.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 0.969050894085282 0.17317984512580534 0.17871078411137045 0.0
88 NR_163636.1 1 1454 1 1316 90.5089 0.905089 31.0 1.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 0.9050894085281981 0.2930914039992904 0.3238259129293072 0.0
89 NR_163637.1 1 1454 1 1413 97.1802 0.971802 33.5 1.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 0.9718019257221459 0.16553834264264772 0.17034164911706282 0.0
90 NR_169348.1 1 1367 27 1359 99.4148 26.2451 35.3 8.85 2584944 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella faecalis 26.245062179956108 2.4514158710870153 0.09340484142419796 0.05
91 NR_170509.1 1 1538 1 1416 92.0676 0.920676 27.0 36.0 2530391 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Duncaniella Duncaniella freteri 0.9206762028608583 0.2702434686473831 0.29352715733027906 0.0
92 NR_173570.1 1 1471 3 1445 98.2325 2.76547 33.4 5.67 1912090 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Gluceribacter Gluceribacter canis 2.7654656696125084 0.6170507561239306 0.22312725227588542 0.01
93 NR_179173.1 1 1401 12 1396 99.6431 11.4768 32.9 7.75 2126740 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium fessum 11.476802284082797 1.280027233112968 0.11153169684627579 0.02
94 NR_179183.1 1 1459 1 1408 96.5045 0.965045 31.1 1.0 1727145 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna chitinilytica 0.9650445510623715 0.1836669962927379 0.19031970709595494 0.0
95 NR_179270.1 1 1482 3596 1482 100.0 3518.33 33.3 59.8 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 3518.334008097166 145.13814366417708 0.041251951443539235 6.58
96 NR_179545.1 1 1471 1 1412 95.9891 0.959891 27.5 2.0 1870987 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella vaginalis 0.9598912304554724 0.19621431178726792 0.2044130684412685 0.0
97 NR_179587.1 1 1453 1 1448 99.6559 0.996559 36.6 1.0 1926283 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Lachnoclostridium edouardi 0.9965588437715073 0.05856035068460492 0.0587625618402838 0.0
98 NR_179604.1 1 1455 63 1455 100.0 61.3924 33.5 46.5 1944635 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella seckii 61.39243986254296 2.0584110975175904 0.033528739078074625 0.12
99 NR_179646.1 1 1556 12 1488 95.6298 11.1414 33.8 3.33 2045301 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera vaginalis (ex Bordigoni et al. 2020) 11.141388174807197 2.609663498280198 0.234231449199584 0.02
100 NR_179932.1 1 1396 89 1394 99.8567 86.3367 33.7 5.88 2144175 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera stantonii 86.33667621776505 7.504237684256469 0.08691830648343121 0.16
101 NR_180048.1 1 1509 1 1406 93.1743 0.931743 28.2 10.0 759821 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora amygdalina 0.9317428760768721 0.25218661534044745 0.27066116824234365 0.0
102 NR_180458.1 1 1490 1 1433 96.1745 0.961745 28.6 1.0 2650157 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides zhangwenhongii 0.961744966442953 0.19181132908302367 0.19944094929079223 0.0
103 NR_180797.1 1 1468 203 1450 98.7738 193.702 33.9 25.3 2605778 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium porci 193.70231607629427 25.82216102663335 0.13330847844102534 0.37
104 NR_180820.1 1 1475 5 1457 98.7797 4.73898 32.3 9.6 2606632 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Porcincola Porcincola intestinalis 4.738983050847458 0.8002154263236138 0.1688580477578441 0.01
105 NR_180822.1 1 1501 26 1453 96.8021 23.7575 32.6 1.08 2606636 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Bilifractor Bilifractor porci 23.757495003331112 5.512853866100161 0.2320469336235654 0.05
106 NR_180825.1 1 1432 1 1356 94.6927 0.946927 27.8 1.0 2605790 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Roseburia porci 0.946927374301676 0.22417832656126357 0.23674289353667363 0.0
107 NR_180830.1 1 1459 1 1391 95.3393 0.953393 30.7 1.0 2606626 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Sodaliphilus pleomorphus 0.9533927347498287 0.21079617661635186 0.2211010939491426 0.0
108 NR_180833.1 1 1470 8 1436 97.6871 7.62993 33.0 7.5 2606635 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Waltera Waltera intestinalis 7.629931972789116 1.3157039431880502 0.17243979997204295 0.01
109 NR_181010.1 1 1412 1 1151 81.5156 0.815156 32.4 1.0 2786956 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola faecalis 0.8151558073654391 0.38817111830201706 0.47619254478058043 0.0
110 NR_181358.1 1 1404 4 1392 99.1453 3.8547 33.9 2.75 2788944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena absiana 3.8547008547008548 0.5009669953750564 0.12996261299086828 0.01
111 NR_181395.1 1 1394 1 1163 83.429 0.83429 30.1 1.0 2763669 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Qiania Qiania dongpingensis 0.8342898134863702 0.3718202799730632 0.44567280333830617 0.0
112 NR_181398.1 1 1390 254 1336 96.1151 235.962 33.1 13.8 2763667 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Wansuia Wansuia hejianensis 235.9618705035971 54.80776725881923 0.2322738294193329 0.46
113 NR_181532.1 1 1419 23 1415 99.7181 22.3735 33.8 47.7 2792859 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides humanifaecis 22.37350246652572 1.441859776238662 0.0644449736198394 0.04
114 NR_181885.1 1 1463 10 1459 99.7266 9.58852 32.3 10.5 2885351 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Hominisplanchenecus Hominisplanchenecus faecis 9.588516746411484 1.0523829943225975 0.10975451387895352 0.02

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025514.1 1 1518 1 1433 94.4005 0.944005 27.5 49 158847 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas hypermegale 0.9440052700922266 0.22991154849273737 0.24354900949893604 9.09
1 NR_041277.1 1 1490 2 1459 97.9195 1.92081 31.1 60 484018 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola plebeius 1.9208053691275169 0.3384281010325364 0.17619073044670833 18.18
2 NR_041590.1 1 1342 1 1105 82.3398 0.823398 33.7 1 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 0.823397913561848 0.3813316004527351 0.46311946407924937 9.09
3 NR_043657.1 1 1553 1 1448 93.2389 0.932389 30.5 6 349095 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera paucivorans 0.9323889246619447 0.25107731444653897 0.26928388766262085 9.09
4 NR_074515.1 1 1510 1 1440 95.3642 0.953642 32.4 49 435590 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 0.9536423841059603 0.21025838233625863 0.22047927592204897 9.09
5 NR_102980.1 1 1552 2 1477 95.1675 1.88209 34.6 1 1064535 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 1.8820876288659794 0.44794924757572335 0.23800658412787493 18.18
6 NR_113195.1 1 1490 1 1421 95.3691 0.953691 31.9 0 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 0.9536912751677852 0.2101528654019015 0.2203573324763077 9.09
7 NR_179270.1 1 1482 2 1480 99.865 1.98111 36.8 60 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 1.98110661268556 0.14572399445822684 0.07355686641249734 18.18

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_026100.1 1 1499 2 1445 96.3976 1.91661 33.6 1 1286362 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora celerecrescens 1.9166110740493663 0.3853352371647074 0.20105030299683133 50.0
1 NR_041590.1 1 1342 1 1251 93.2191 0.932191 33.7 38 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 0.9321907600596125 0.2514182708537603 0.2697068900765358 25.0
2 NR_113165.1 1 1466 1 1408 96.0437 0.960437 29.3 34 147207 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella intestinalis 0.9604365620736699 0.1949311989030471 0.20296103522149647 25.0

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025514.1 1 1518 1 1455 95.8498 0.958498 32.6 60 158847 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas hypermegale 0.958498023715415 0.19944814426075516 0.2080840432906023 14.29
1 NR_029097.1 1 1374 1 1290 93.8865 0.938865 35.4 1 237576 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium sinus 0.9388646288209607 0.2395784580671653 0.25517891580177143 14.29
2 NR_043657.1 1 1553 1 1447 93.1745 0.931745 34.9 2 349095 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera paucivorans 0.9317450096587251 0.2521829626179891 0.27065662815876784 14.29
3 NR_044473.1 1 1399 1 1369 97.8556 0.978556 31.6 1 491921 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas rupellensis 0.9785561115082202 0.14485871785340498 0.14803312365004642 14.29
4 NR_113411.1 1 1493 1 1445 96.785 0.96785 33.7 60 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 0.9678499665103818 0.17639843773751163 0.18225803982152586 14.29
5 NR_134080.1 1 1566 1 1438 91.8263 0.918263 31.2 1 879612 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera indica 0.9182630906768838 0.27396347745168576 0.29834965625127946 14.29
6 NR_144744.1 1 1491 1 1406 94.2991 0.942991 31.8 1 1841856 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides mediterraneensis 0.9429912810194501 0.2318592783149877 0.24587637551041724 14.29

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025230.1 1 1411 32 1408 99.7874 30.1637 33.6 1.53 187326 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera micronuciformis 30.16371367824238 3.9612923515553216 0.1313264140420704 0.11
1 NR_025514.1 1 1518 2091 1508 99.3412 1983.27 32.6 36.2 158847 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas hypermegale 1983.270092226614 335.4318547160171 0.16913069784631718 7.46
2 NR_025518.1 1 1494 524 1465 98.0589 489.965 33.4 48.9 179995 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum thomasii 489.9645247657296 105.47064508402057 0.21526179907504536 1.87
3 NR_025567.1 1 1498 48 1475 98.4646 45.3531 33.2 11.0 208479 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster bolteae 45.35313751668892 8.399018882784443 0.18519157312311185 0.17
4 NR_025569.1 1 1494 2 1462 97.8581 1.93775 34.6 8.0 208962 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia albertii 1.9377510040160641 0.31813845606050195 0.1641792239566114 0.01
5 NR_025796.1 1 1435 16 1352 94.216 14.4167 33.0 5.06 259063 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna jejuensis 14.416724738675958 3.9025408149989698 0.2706953823242228 0.06
6 NR_025903.1 1 1537 1 1442 93.8191 0.938191 33.8 14.0 1379 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans 0.9381912817176318 0.2408078084835684 0.2566724005820004 0.0
7 NR_025981.1 1 1477 7 1446 97.9012 6.39404 31.6 1.71 831 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio fibrisolvens 6.394041976980366 1.4725351941582827 0.23029801797668187 0.02
8 NR_026100.1 1 1499 38 1468 97.932 36.1788 34.0 2.47 1286362 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora celerecrescens 36.17878585723816 6.804919412624582 0.18809142571773582 0.14
10 NR_026330.1 1 1474 5 1443 97.8969 4.69199 36.5 8.8 53442 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Eubacteriaceae Eubacterium Eubacterium callanderi 4.691994572591588 0.8302970385896562 0.17696035784863406 0.02
11 NR_026331.1 1 1488 60 1488 100.0 57.8562 35.9 15.9 623 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri 57.85618279569893 7.431642928165164 0.12845028083528592 0.21
12 NR_026409.1 1 1495 14 1454 97.2575 13.3492 33.9 4.64 29370 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora sphenoides 13.349163879598661 2.3762673372525454 0.17800870216929177 0.05
13 NR_026476.1 1 1463 2 1422 97.1975 1.89132 34.2 1.0 83771 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinivibrio Succinivibrio dextrinosolvens 1.8913192071086808 0.39104794091234296 0.20675935582029553 0.01
14 NR_026493.1 1 1488 11 1464 98.3871 10.5249 33.7 1.73 69825 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora indolis 10.52486559139785 1.6613652188897154 0.15785144280109165 0.04
15 NR_026494.1 1 1499 1 1432 95.5304 0.955304 37.1 0.0 84030 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora saccharolytica 0.9553035356904603 0.2066366143445173 0.2163046682279549 0.0
16 NR_027549.1 1 1473 2 1448 98.3028 1.89885 36.3 0.5 585054 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 1.898845892735913 0.3533642386325585 0.18609421648400382 0.01
17 NR_028862.1 1 1537 310 1534 99.8048 295.092 33.2 59.3 209880 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Allisonella Allisonella histaminiformans 295.09238776838 48.57993085428039 0.16462617426922957 1.11
18 NR_029097.1 1 1374 2142 1328 96.6521 1992.42 32.8 1.4 237576 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium sinus 1992.4163027656477 433.11050749120045 0.2173795239930557 7.65
19 NR_029207.1 1 1426 21 1395 97.8261 19.4748 33.8 4.24 907 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 19.47475455820477 3.979575410980404 0.20434534356191913 0.07
20 NR_029356.1 1 1550 25 1462 94.3226 23.0239 33.4 46.1 292800 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Oscillospiraceae Flavonifractor Flavonifractor plautii 23.023870967741935 5.939377439635177 0.25796606695532054 0.09
21 NR_037088.1 1 1453 3 1440 99.1053 2.90365 31.7 1.0 76122 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella tannerae 2.9036476256022024 0.3913295209063135 0.13477169800352537 0.01
22 NR_040877.1 1 1494 6 1474 98.6613 5.59103 30.6 0.667 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 5.591030789825971 0.9807790706358762 0.17542008039387036 0.02
23 NR_041277.1 1 1490 200 1489 99.9329 191.644 33.1 56.9 484018 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola plebeius 191.64429530201343 30.584567285593952 0.15959028280698648 0.71
24 NR_041342.1 1 1488 23 1469 98.7231 22.0202 32.2 39.0 823 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides distasonis 22.02016129032258 3.6840431820940296 0.1673031879068521 0.08
25 NR_041343.1 1 1492 334 1492 100.0 315.693 33.3 52.6 46503 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides merdae 315.6930294906166 55.05428351833886 0.17439182489132296 1.19
26 NR_041351.1 1 1493 21 1452 97.2539 19.641 31.7 1.67 357276 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola dorei 19.640991292699262 4.0349753004293785 0.20543643853297852 0.07
27 NR_041446.1 1 1456 22 1451 99.6566 21.0913 31.7 3.09 376804 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola barnesiae 21.091346153846153 2.828530440282721 0.13410857797556555 0.08
28 NR_041464.1 1 1492 1 1327 88.941 0.88941 30.5 1.0 387661 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides johnsonii 0.8894101876675603 0.3136235095472188 0.3526196505233236 0.0
29 NR_041508.1 1 1461 1 1343 91.9233 0.919233 32.7 1.0 397865 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Barnesiellaceae Barnesiella Barnesiella viscericola 0.919233401779603 0.27247633811452693 0.29641692478430665 0.0
30 NR_041590.1 1 1342 4148 1315 97.9881 3880.56 33.7 7.82 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 3880.560357675112 840.0362921560979 0.2164729355374267 14.81
31 NR_042152.1 1 1456 13 1447 99.3819 11.6332 31.3 0.154 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 11.633241758241759 2.59968181417641 0.22347010989732277 0.05
32 NR_042832.1 1 1456 1 1400 96.1538 0.961538 31.2 1.0 301302 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Roseburia faecis 0.9615384615384616 0.19230769230768657 0.19999999999999404 0.0
33 NR_043224.1 1 1455 32 1455 100.0 30.6467 32.0 0.0 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 30.646735395189005 4.1105364565847955 0.13412640542555399 0.11
34 NR_043657.1 1 1553 871 1532 98.6478 804.129 33.4 13.6 349095 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera paucivorans 804.1287830006439 176.97237360552754 0.22007964065798877 3.11
35 NR_043681.1 1 1420 1 1307 92.0423 0.920423 33.1 2.0 358743 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster citroniae 0.9204225352112676 0.27063793504704947 0.2940366241521119 0.0
36 NR_043881.1 1 1407 1 1389 98.7207 0.987207 36.5 35.0 384602 Bacteria unclassified Bacteria kingdom Actinomycetota Actinomycetes Micrococcales Micrococcaceae Micrococcus Micrococcus flavus 0.9872068230277186 0.11238109981325765 0.11383744235943377 0.0
37 NR_044473.1 1 1399 89 1398 99.9285 83.8363 32.3 5.1 491921 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas rupellensis 83.83631165117941 8.719745627512296 0.10400917521029357 0.32
38 NR_074515.1 1 1510 66 1490 98.6755 61.8523 32.8 26.5 435590 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 61.8523178807947 12.46436156395373 0.20151809974164195 0.24
39 NR_074902.1 1 1542 28 1505 97.6005 26.3658 36.5 5.93 585054 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 26.365758754863812 5.8369385965977365 0.22138329683081734 0.1
40 NR_074980.1 1 1551 1 1438 92.7144 0.927144 27.0 0.0 479436 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella parvula 0.927143778207608 0.259900351555226 0.28032367542569925 0.0
41 NR_102893.1 1 1537 4 1479 96.2264 3.65777 31.3 1.5 43305 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio proteoclasticus 3.657774886141835 0.9182561016005293 0.2510422675489174 0.01
42 NR_102980.1 1 1552 2126 1530 98.5825 1987.03 34.0 1.82 1064535 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 1987.0335051546392 429.68605347102886 0.2162449965520782 7.59
43 NR_104700.1 1 1493 7 1486 99.5311 6.32485 29.2 2.29 1532 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia coccoides 6.324849296718018 1.2850440872423818 0.20317386659460723 0.02
44 NR_104735.1 1 1511 5 1454 96.2277 4.61019 32.8 2.0 45851 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Butyrivibrio Butyrivibrio crossotus 4.610191925876903 1.1152641210893544 0.2419127314048255 0.02
45 NR_104803.1 1 1521 26 1488 97.8304 24.4569 34.0 4.46 39482 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena contorta 24.456936226166995 5.264435981973121 0.21525328983524067 0.09
46 NR_104826.1 1 1530 11 1464 95.6863 10.4268 36.6 0.818 624 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella sonnei 10.426797385620915 2.2402003451473678 0.21485028070428588 0.04
47 NR_104897.1 1 1504 1 1422 94.5479 0.945479 29.8 38.0 47671 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Lautropia Lautropia mirabilis 0.9454787234042553 0.2270434033265785 0.24013592025539665 0.0
48 NR_104901.1 1 1515 2 1458 96.2376 1.86733 34.6 6.0 621 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella boydii 1.8673267326732674 0.4362551962052199 0.2336255292509396 0.01
49 NR_112789.1 1 1468 3 1454 99.0463 2.8154 30.0 3.33 536633 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia glucerasea 2.8153950953678475 0.513424729528564 0.18236329614031743 0.01
50 NR_112899.1 1 1491 11 1440 96.5795 10.3789 33.1 0.818 742742 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella tanakaei 10.378940308517773 2.17307755965435 0.2093737409657277 0.04
51 NR_112901.1 1 1469 98 1458 99.2512 93.8502 33.7 0.0102 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 93.8502382573179 14.58490907691574 0.15540620192062743 0.35
52 NR_112940.1 1 1459 5 1451 99.4517 4.90816 32.1 10.0 28116 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides ovatus 4.90815627141878 0.4532216112493268 0.09234050144012956 0.02
53 NR_112943.1 1 1476 3 1449 98.1707 2.90786 34.1 60.0 449673 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides stercoris 2.907859078590786 0.43978070622987914 0.1512386585263983 0.01
54 NR_112946.1 1 1489 101 1489 100.0 95.5581 32.6 2.72 821 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus 95.55809267965077 16.96757910706002 0.17756297380214756 0.36
55 NR_112947.1 1 1465 2 1456 99.3857 1.95768 32.8 27.5 657309 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides xylanisolvens 1.957679180887372 0.2298183125907509 0.11739324544820434 0.01
56 NR_113015.1 1 1490 11 1464 98.255 10.2671 33.8 3.36 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 10.267114093959732 2.006313623566886 0.19541164198683883 0.04
57 NR_113064.1 1 1490 254 1472 98.7919 239.76 33.4 0.976 1236538 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 239.75973154362416 46.20845664702217 0.19272817978866716 0.91
58 NR_113077.1 1 1480 1 1416 95.6757 0.956757 32.0 28.0 454154 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella clara 0.9567567567567568 0.20340419159163814 0.2125976013810907 0.0
59 NR_113078.1 1 1488 2 1430 96.1022 1.8582 29.4 5.0 454155 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Paraprevotella Paraprevotella xylaniphila 1.8581989247311828 0.4468226936590586 0.24046009698541743 0.01
60 NR_113094.1 1 1494 35 1474 98.6613 32.658 31.7 1.77 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 32.65796519410977 6.686227338358044 0.20473496430708366 0.12
61 NR_113097.1 1 1480 20 1474 99.5946 18.2966 31.8 6.9 873513 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella buccae 18.29662162162162 3.518367164677186 0.19229600072832215 0.07
62 NR_113101.1 1 1492 1 1200 80.429 0.80429 31.6 1.0 28129 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella denticola 0.8042895442359249 0.3967466109101545 0.49328828623162546 0.0
63 NR_113110.1 1 1405 1 1235 87.9004 0.879004 38.7 1.0 439703 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella maculosa 0.8790035587188612 0.32612314005362847 0.3710145844334802 0.0
64 NR_113118.1 1 1481 1 1402 94.6658 0.946658 37.1 0.0 28135 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella oris 0.9466576637407157 0.2247152229415841 0.23737749299321403 0.0
65 NR_113119.1 1 1481 1 1416 95.6111 0.956111 31.8 0.0 28135 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella oris 0.9561107359891965 0.20484871616730868 0.2142520823755538 0.0
66 NR_113165.1 1 1466 6 1447 98.704 5.74761 31.9 25.8 147207 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella intestinalis 5.747612551159618 0.946962057181558 0.16475746212059864 0.02
67 NR_113195.1 1 1490 93 1489 99.9329 87.4953 32.9 1.42 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 87.49530201342282 16.04277978712079 0.18335589932199603 0.33
68 NR_113199.1 1 1511 1 1321 87.4255 0.874255 31.8 0.0 1527 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna aminovalerica 0.8742554599602912 0.33156123218782596 0.37924982727918627 0.0
69 NR_113231.1 1 1491 528 1474 98.8598 502.461 33.4 18.1 536633 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia glucerasea 502.4614352783367 83.46178108429616 0.1661058445969347 1.88
70 NR_113260.1 1 1470 1 1457 99.1156 0.991156 36.7 19.0 1305 Bacteria unclassified Bacteria kingdom Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sanguinis 0.991156462585034 0.09362333715989841 0.09445868608445482 0.0
71 NR_113270.1 1 1493 4 1444 96.718 3.63563 31.4 1.5 1121114 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia producta 3.635632953784327 0.9001690422697751 0.24759623804509473 0.01
72 NR_113273.1 1 1469 18 1430 97.3451 17.1164 31.4 0.222 742742 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella tanakaei 17.11640571817563 2.9733436359186562 0.17371308467883018 0.06
73 NR_113274.1 1 1478 116 1478 100.0 110.621 33.3 0.491 762983 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Succinatimonas Succinatimonas hippei 110.62110960757781 18.919311277867656 0.1710280374603261 0.41
74 NR_113307.1 1 1178 1 944 80.1358 0.801358 33.2 1.0 1122219 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera cerevisiae 0.801358234295416 0.3989777119368309 0.4978768481584606 0.0
75 NR_113393.1 1 1528 12 1508 98.6911 11.375 31.9 10.4 2741 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Peptococcaceae Peptococcus Peptococcus niger 11.375 2.100256310710821 0.1846379174251271 0.04
76 NR_113410.1 1 1390 50 1387 99.7842 48.3532 33.3 3.98 208479 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster bolteae 48.35323741007194 5.348405291249308 0.11061111060446263 0.18
77 NR_113411.1 1 1493 1348 1493 100.0 1291.19 33.0 39.5 537011 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella copri 1291.1855324849296 204.2248895147747 0.15816850822494666 4.81
78 NR_114079.1 1 1467 1 1145 78.0504 0.780504 35.8 0.0 564 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia fergusonii 0.7805044308111793 0.41390489764594113 0.5303043535778128 0.0
79 NR_114326.1 1 1423 1 1231 86.5074 0.865074 28.4 1.0 1150298 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Fusicatenibacter Fusicatenibacter saccharivorans 0.865073787772312 0.34164474162728964 0.39493133008581083 0.0
80 NR_114392.1 1 1494 1 1337 89.4913 0.894913 33.8 1.0 1544 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena orotica 0.8949129852744311 0.3066655084316399 0.3426763422564473 0.0
81 NR_114807.1 1 1456 15 1455 99.9313 13.0913 32.3 0.333 168384 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Marvinbryantia Marvinbryantia formatexigens 13.091346153846153 3.2626393029013556 0.24922107051174514 0.05
82 NR_115211.1 1 1485 13 1458 98.1818 12.4458 32.7 0.923 253257 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora amygdalina 12.445791245791245 1.980525760092008 0.15913216933971605 0.05
83 NR_116050.1 1 1454 1 1400 96.2861 0.962861 32.8 1.0 439703 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella maculosa 0.9628610729023384 0.18910216072720087 0.19639610121239293 0.0
84 NR_116181.1 1 1435 1 1398 97.4216 0.974216 33.2 25.0 28116 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides ovatus 0.9742160278745644 0.15849024861760536 0.16268491184997402 0.0
85 NR_116860.1 1 1455 29 1455 100.0 27.5436 31.9 0.0345 305719 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella baroniae 27.54364261168385 3.7584250095865936 0.1364534481721852 0.1
86 NR_117126.1 1 1525 8 1453 95.2787 7.41508 33.2 1.5 1544 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena orotica 7.415081967213115 1.7701075478586838 0.23871719229611715 0.03
87 NR_117129.1 1 1525 1 1414 92.7213 0.927213 29.5 1.0 1544 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena orotica 0.9272131147540984 0.25978636334900684 0.2801797765963475 0.0
88 NR_117373.1 1 1327 2 1144 86.2095 1.70234 34.0 7.0 1236515 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola sartorii 1.7023360964581764 0.6963262181157646 0.4090415632756173 0.01
89 NR_117734.1 1 1482 1 1413 95.3441 0.953441 37.8 31.0 850 Bacteria unclassified Bacteria kingdom Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium mortiferum 0.9534412955465587 0.21069169773168145 0.22098025197335594 0.0
91 NR_118128.1 1 1310 9 1299 99.1603 8.6687 33.4 4.33 1531 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster clostridioformis 8.668702290076336 1.0404846176724944 0.12002772535672487 0.03
92 NR_118249.1 1 1463 1 1450 99.1114 0.991114 35.7 46.0 1107316 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria oralis 0.9911141490088858 0.09384504591760717 0.09468641529479951 0.0
93 NR_118334.1 1 1455 2 1432 98.4192 1.93333 30.8 1.0 671218 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Alloprevotella Alloprevotella rava 1.9333333333333333 0.306328814343566 0.15844593845356864 0.01
94 NR_119085.1 1 1503 3 1434 95.4092 2.50832 30.8 23.7 29364 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium [Clostridium] polysaccharolyticum 2.5083166999334665 0.7719491885703426 0.3077558701382559 0.01
95 NR_125570.1 1 1395 1778 1380 98.9247 1633.96 33.2 1.37 796943 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium parvum 1633.9641577060931 420.34894550993687 0.25725713965480174 6.35
96 NR_125571.1 1 1436 232 1436 100.0 219.495 32.4 12.3 796944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium asaccharolyticum 219.49512534818942 29.30445988233588 0.13350847694612644 0.83
97 NR_133027.1 1 1519 572 1519 100.0 545.0 33.7 1.13 1232428 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera massiliensis 545.0 88.82002425332232 0.16297252156572903 2.04
98 NR_133762.1 1 1409 1 1260 89.4251 0.894251 35.6 1.0 1096246 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Hungatella Hungatella effluvii 0.8942512420156139 0.3075157852357276 0.3438807471405874 0.0
99 NR_134080.1 1 1566 878 1530 97.7011 817.649 33.6 1.26 879612 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera indica 817.6494252873563 191.1938104077623 0.2338334798444563 3.13
100 NR_136472.1 1 1504 5 1464 97.3404 4.54787 36.6 9.0 1499973 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia marmotae 4.547872340425532 0.8926983626521139 0.19628923061824258 0.02
101 NR_144607.1 1 1378 3 1341 97.3149 2.86067 34.3 3.33 1796615 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia caecimuris 2.86066763425254 0.5396124138372496 0.18863163527847027 0.01
102 NR_144608.1 1 1485 2 1371 92.3232 1.79327 29.7 1.0 1796618 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Cuneatibacter Cuneatibacter caecimuris 1.7932659932659933 0.5634983679914809 0.3142302202280695 0.01
103 NR_144722.1 1 1476 2 1437 97.3577 1.8916 29.6 1.0 1632013 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Oscillospiraceae Drancourtella Drancourtella massiliensis 1.89159891598916 0.38664688987679313 0.204402152384723 0.01
104 NR_144744.1 1 1491 111 1473 98.7928 104.777 32.8 4.55 1841856 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides mediterraneensis 104.7773306505701 19.064085395382573 0.18194856918965463 0.4
105 NR_144750.1 1 1493 420 1492 99.933 392.977 32.8 42.6 1852370 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotellamassilia Prevotellamassilia timonensis 392.97655726724713 79.84883650306813 0.2031898214446574 1.5
106 NR_145844.1 1 1489 4 1444 96.9778 3.74547 34.1 16.0 1411144 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides caecigallinarum 3.745466756212223 0.7672493238309334 0.20484745260610718 0.01
107 NR_147373.1 1 1532 5 1495 97.5849 4.4393 34.2 1.0 1852379 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Colibacter Colibacter massiliensis 4.439295039164491 0.9806730380044374 0.22090738041799707 0.02
108 NR_147376.1 1 1530 1 1455 95.098 0.95098 29.5 1.0 1852378 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Caecibacter Caecibacter massiliensis 0.9509803921568627 0.21590897593671557 0.2270383045932473 0.0
109 NR_147381.1 1 1497 119 1477 98.664 112.613 33.7 59.9 1852381 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Duodenibacillus Duodenibacillus massiliensis 112.6125584502338 19.159062135830286 0.17013255359345322 0.42
110 NR_147396.1 1 1453 2 1440 99.1053 1.95251 32.9 1.0 1917870 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Enterocloster Enterocloster hominis (ex Hitch et al. 2024) 1.9525120440467998 0.2512505967769045 0.12868068985436806 0.01
111 NR_151895.1 1 1478 2 1407 95.1962 1.79702 31.4 1.0 433286 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Anaerocolumna Anaerocolumna cellulosilytica 1.7970230040595399 0.50779239176846 0.2825742300579006 0.01
112 NR_156078.1 1 1412 6 1400 99.1501 5.68272 32.7 0.333 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 5.682719546742209 0.8448554349996964 0.14867097136335636 0.02
113 NR_156079.1 1 1412 4 1403 99.3626 3.82082 29.0 0.5 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 3.8208215297450425 0.5516315274583643 0.14437510968882492 0.01
114 NR_156081.1 1 1411 3 1391 98.5826 2.89157 33.6 1.0 1469948 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Kineothrix Kineothrix alysoides 2.891566265060241 0.4567857059012173 0.15797172329083764 0.01
115 NR_156907.1 1 1492 1 1248 83.6461 0.836461 32.2 1.0 1912855 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalimonas Faecalimonas umbilicata 0.8364611260053619 0.36985660827840383 0.44216831694821995 0.0
116 NR_157635.1 1 1561 1 1472 94.2985 0.942985 35.7 2.0 1675036 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera hexanoica 0.942985265855221 0.23187077054941269 0.2458901309970334 0.0
117 NR_159117.1 1 1417 4 1405 99.1531 3.92025 31.9 18.2 1912896 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides koreensis 3.920254057868737 0.42834363537249714 0.10926425406351548 0.01
118 NR_159118.1 1 1433 1 1332 92.9518 0.929518 35.6 1.0 1912894 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides kribbi 0.9295184926727146 0.25595676285685287 0.2753648957761788 0.0
119 NR_163613.1 1 1478 2 1343 90.866 1.60487 33.7 24.5 2003188 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Parolsenella Parolsenella catena 1.604871447902571 0.6493699067259255 0.4046242504809941 0.01
120 NR_163634.1 1 1454 1 1397 96.0798 0.960798 31.7 0.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 0.9607977991746905 0.19407572819845612 0.2019943513246637 0.0
121 NR_163636.1 1 1454 1 1320 90.784 0.90784 29.7 1.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 0.9078404401650619 0.28925105940336504 0.31861442452461575 0.0
122 NR_163637.1 1 1454 4 1446 99.4498 3.85076 32.0 1.0 2025493 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia hominis 3.8507565337001375 0.5209597057374192 0.1352876249584225 0.01
123 NR_169348.1 1 1367 100 1358 99.3416 96.0497 34.3 12.6 2584944 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella faecalis 96.04974396488662 9.029603325632818 0.09400965533998525 0.36
124 NR_170509.1 1 1538 3 1438 93.498 2.71391 34.9 6.67 2530391 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Duncaniella Duncaniella freteri 2.7139141742522757 0.7776637333068724 0.28654691466841636 0.01
125 NR_171388.1 1 1530 1 1330 86.9281 0.869281 29.8 1.0 1912897 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia argi 0.869281045751634 0.33709273093405573 0.38778336716474077 0.0
126 NR_171390.1 1 1531 1 1323 86.4141 0.864141 29.2 1.0 1912897 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia argi 0.8641410842586544 0.34263868835105354 0.39650780942211866 0.0
127 NR_173570.1 1 1471 7 1444 98.1645 6.33583 32.3 10.6 1912090 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Gluceribacter Gluceribacter canis 6.335825968728756 1.426204685113447 0.22510161929204725 0.02
128 NR_173691.1 1 1434 1 1414 98.6053 0.986053 27.7 1.0 1871031 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Thermophilibacter Thermophilibacter mediterraneus 0.9860529986052998 0.11727097913293034 0.11892969170906798 0.0
129 NR_173693.1 1 1478 2 1432 96.8877 1.90663 31.4 4.0 1852385 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella Olsenella phocaeensis 1.9066305818673883 0.3832725513851235 0.20102087684429118 0.01
130 NR_178367.1 1 1454 14 1453 99.9312 13.6733 33.9 60.0 673271 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Catenibacillus Catenibacillus scindens 13.673314993122421 0.8915870822659496 0.06520635871508931 0.05
131 NR_178499.1 1 1452 2 1417 97.5895 1.85124 31.4 1.0 1111454 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera vaginalis (ex Srinivasan et al. 2021) 1.8512396694214877 0.41813880591960306 0.22586962284049986 0.01
132 NR_178974.1 1 1431 1 1419 99.1614 0.991614 34.6 21.0 2316085 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas bubulae 0.9916142557651991 0.09118894411291789 0.09196009797433792 0.0
133 NR_179173.1 1 1401 24 1401 100.0 23.1642 32.8 5.42 2126740 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium fessum 23.164168451106352 2.0587795765766344 0.08887776744164992 0.09
134 NR_179270.1 1 1482 5162 1482 100.0 5044.34 33.4 59.8 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 5044.338731443994 221.2608330594552 0.04386319889269549 18.43
135 NR_179447.1 1 1528 3 1462 95.6806 2.71335 28.3 7.0 2479838 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium transplantifaecale 2.7133507853403143 0.7434036465216489 0.2739799256838108 0.01
136 NR_179525.1 1 1471 2 1426 96.9409 1.9259 36.4 1.0 1841863 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Eggerthellales Eggerthellaceae Gordonibacter Gordonibacter massiliensis (ex Traore et al. 2017) 1.9259007477906187 0.3602657655511127 0.1870635161050783 0.01
137 NR_179538.1 1 1493 15 1450 97.1199 14.2733 33.2 3.47 1852382 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Lachnoclostridium urinimassiliense 14.273275284661755 2.5805838583815373 0.18079829660082755 0.05
138 NR_179545.1 1 1471 9 1450 98.5724 8.55744 31.9 3.33 1870987 Bacteria unclassified Bacteria kingdom Actinomycetota Coriobacteriia Coriobacteriales Coriobacteriaceae Collinsella Collinsella vaginalis 8.557443915703603 1.4644892449431097 0.17113629482930684 0.03
139 NR_179587.1 1 1453 2 1452 99.9312 1.95733 34.8 1.0 1926283 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoclostridium Lachnoclostridium edouardi 1.9573296627666896 0.2054897614118586 0.10498474800683212 0.01
140 NR_179604.1 1 1455 389 1455 100.0 380.41 34.0 44.2 1944635 Bacteria unclassified Bacteria kingdom Pseudomonadota Betaproteobacteria Burkholderiales Sutterellaceae Sutterella Sutterella seckii 380.4103092783505 13.188041166194958 0.034667938393186715 1.39
141 NR_179631.1 1 1494 1 1392 93.1727 0.931727 30.8 1.0 2014528 Bacteria unclassified Bacteria kingdom Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium dentalis 0.9317269076305221 0.2522139512948962 0.2706951460018498 0.0
142 NR_179646.1 1 1556 69 1510 97.0437 64.0084 32.6 3.1 2045301 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera vaginalis (ex Bordigoni et al. 2020) 64.00835475578405 14.785633863939344 0.23099537428124967 0.25
143 NR_179932.1 1 1396 734 1395 99.9284 708.651 33.7 6.46 2144175 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera stantonii 708.6511461318051 63.302844150029664 0.08932864145577166 2.62
144 NR_179976.1 1 1379 21 1340 97.1719 19.8049 33.2 15.7 2094151 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Paramuribaculum Paramuribaculum intestinale 19.804931109499638 4.106321420887869 0.2073383339828044 0.07
145 NR_180048.1 1 1509 2 1458 96.6203 1.9006 32.9 7.5 759821 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Lacrimispora Lacrimispora amygdalina 1.900596421471173 0.39637979325905676 0.20855547699718152 0.01
146 NR_180797.1 1 1468 168 1468 100.0 159.959 33.3 18.0 2605778 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium porci 159.9591280653951 20.060934892883676 0.12541287974939627 0.6
147 NR_180820.1 1 1475 51 1472 99.7966 47.3729 31.7 7.61 2606632 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Porcincola Porcincola intestinalis 47.3728813559322 8.251262471631494 0.17417691800581686 0.18
148 NR_180822.1 1 1501 266 1497 99.7335 244.373 33.4 2.34 2606636 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Bilifractor Bilifractor porci 244.37308461025984 53.467287954019966 0.21879368605299823 0.95
149 NR_180825.1 1 1432 3 1427 99.6508 2.64385 29.0 1.0 2605790 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Roseburia Roseburia porci 2.643854748603352 0.5669961042670293 0.21445811445070945 0.01
150 NR_180830.1 1 1459 8 1436 98.4236 7.60247 33.8 2.38 2606626 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Muribaculaceae Sodaliphilus Sodaliphilus pleomorphus 7.602467443454421 1.395535601215093 0.18356350903108734 0.03
151 NR_180833.1 1 1470 63 1470 100.0 59.9497 32.6 3.95 2606635 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Waltera Waltera intestinalis 59.94965986394558 9.46659989065487 0.15790915097999067 0.22
152 NR_180986.1 1 1481 1 1364 92.0999 0.920999 28.7 1.0 2681861 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Sporofaciens Sporofaciens musculi 0.9209993247805537 0.2697398163681421 0.29287732261086397 0.0
153 NR_181211.1 1 1501 1 1276 85.01 0.8501 30.2 1.0 2779518 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia liquoris 0.8500999333777481 0.3569734396967039 0.41991938321689076 0.0
154 NR_181263.1 1 1465 10 1455 99.3174 9.62321 33.1 8.1 2726362 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena faecalis 9.62320819112628 1.0663999344231403 0.1108154279989999 0.04
155 NR_181358.1 1 1404 21 1401 99.7863 20.1061 33.6 6.43 2788944 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Faecalicatena Faecalicatena absiana 20.106125356125357 2.395268859097628 0.1191313003710039 0.07
156 NR_181369.1 1 1427 1 1366 95.7253 0.957253 35.3 1.0 2784388 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium vitabionis 0.9572529782761037 0.2022862176660435 0.2113194967858302 0.0
157 NR_181395.1 1 1394 3 1326 95.122 2.78407 32.1 14.3 2763669 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Qiania Qiania dongpingensis 2.784074605451937 0.6870426383955208 0.24677594380916154 0.01
158 NR_181397.1 1 1401 2 1315 93.8615 1.71949 32.0 1.5 2763671 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Jingyaoa Jingyaoa shaoxingensis 1.7194860813704498 0.569732665797937 0.3313389226994229 0.01
159 NR_181398.1 1 1390 442 1337 96.1871 410.151 33.5 16.3 2763667 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Wansuia Wansuia hejianensis 410.15107913669067 94.96045475070858 0.23152555139093317 1.58
160 NR_181532.1 1 1419 8 1415 99.7181 7.84214 32.3 51.2 2792859 Bacteria unclassified Bacteria kingdom Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides humanifaecis 7.842142353770261 0.5697568731170216 0.07265321737536427 0.03
161 NR_181885.1 1 1463 20 1460 99.7949 18.9392 32.3 4.3 2885351 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Hominisplanchenecus Hominisplanchenecus faecis 18.939166097060834 2.5220267894866906 0.13316461646524572 0.07

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025518.1 1 1494 2 1452 97.1888 1.89759 34.2 60.0 179995 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum thomasii 1.8975903614457832 0.3848984334649912 0.20283536493710647 25.0
1 NR_026331.1 1 1488 3 1471 98.8575 2.90927 34.7 20.3 623 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella flexneri 2.909274193548387 0.40223837430575365 0.1382607301840983 37.5
2 NR_041590.1 1 1342 1 1269 94.5604 0.945604 33.3 49.0 742816 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Selenomonadales Selenomonadaceae Megamonas Megamonas funiformis 0.9456035767511177 0.22679826363226627 0.23984497225729026 12.5
3 NR_104901.1 1 1515 1 1478 97.5578 0.975578 36.6 0.0 621 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella boydii 0.9755775577557756 0.15435668614948855 0.1582208251126354 12.5
4 NR_179270.1 1 1482 1 1472 99.3252 0.993252 36.0 60.0 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 0.9932523616734144 0.08186640155521208 0.08242255917447303 12.5

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_026332.1 1 1487 1 1444 97.1083 0.971083 30.4 29 622 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Shigella Shigella dysenteriae 0.9710827168796234 0.16757408468290172 0.1725641716921571 25.0
1 NR_102980.1 1 1552 2 1481 95.4253 1.86276 32.6 4 1064535 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera elsdenii 1.862757731958763 0.45815027367115746 0.2459526892900852 50.0
2 NR_125570.1 1 1395 1 1264 90.6093 0.906093 30.0 1 796943 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium parvum 0.9060931899641577 0.2916990247922248 0.32193049017812786 25.0

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_179270.1 1 1482 1 1470 99.1903 0.991903 34.6 60 2654621 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Acidaminococcales Acidaminococcaceae Phascolarctobacterium Phascolarctobacterium wakonense 0.9919028340080972 0.0896192049440443 0.09035079029052628 100.0

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_029097.1 1 1374 1 1287 93.6681 0.936681 34.2 1 237576 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Oribacterium Oribacterium sinus 0.9366812227074236 0.24353543835497385 0.2599982069151003 50.0
1 NR_179932.1 1 1396 1 1351 96.7765 0.967765 37.6 8 2144175 Bacteria unclassified Bacteria kingdom Bacillota Negativicutes Veillonellales Veillonellaceae Megasphaera Megasphaera stantonii 0.9677650429799427 0.17662351079619276 0.1825066033097595 50.0

Only taxa present in the abundance table above the abundance_threshold parameter appear in the table.

index reference startpos ref length number of reads covbases pc coverage meandepth meanbaseq meanmapq taxid superkingdom kingdom phylum class order family genus species mean sd Coefficient of Variance pcreads
0 NR_025518.1 1 1494 4 1429 95.6493 3.74029 33.6 51.2 179995 Bacteria unclassified Bacteria kingdom Pseudomonadota Gammaproteobacteria Aeromonadales Succinivibrionaceae Anaerobiospirillum Anaerobiospirillum thomasii 3.7402945113788486 0.8577679817909221 0.22933166871790223 80.0
1 NR_113231.1 1 1491 1 1378 92.4212 0.924212 34.0 4.0 536633 Bacteria unclassified Bacteria kingdom Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia glucerasea 0.9242119382964453 0.2646587074078097 0.2863614896553297 20.0

No taxa present with sufficient coverage for heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

No taxa present with sufficient coverage for heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

No taxa present with sufficient coverage for heatmap.

No taxa present with sufficient coverage for heatmap.

To illustrate consistency of coverage between the reference sequences, each reference is divided into 100 evenly sized windows, and the average depth across all positions in the window is plotted in a cell in the heatmap. Only references with 1% average coverage across the entire sequence are included in the heatmap.

Software versions

Name Version
pysam 0.22.1
pandas 2.0.3
fastcat 0.20.0
minimap2 2.28-r1209
samtools 1.21
taxonkit v0.18.0
Kraken 2.1.3

Workflow parameters

Key Value
fastq /work/richlab/azadmanesh/marm_bioinfo/ont_reads/filtered/cm002/
bam None
sample None
sample_sheet None
classifier minimap2
exclude_host None
max_len 2000
min_len 1000
min_read_qual 7
threads 32
server_threads 2
kraken_clients 2
taxonomy None
reference None
ref2taxid None
database None
taxonomic_rank S
minimap2filter None
minimap2exclude False
keep_bam True
minimap2_by_reference True
min_percent_identity 85
min_ref_coverage 80
store_dir store_dir
out_dir ../marm_bioinfo/data/outputs_wf16s/cm002/
include_read_assignments False
igv False
bracken_length None
bracken_threshold 10
port 8080
host localhost
external_kraken2 False
kraken2_memory_mapping False
kraken2_confidence 0
batch_size 0
real_time False
read_limit None
database_set ncbi_16s_18s
database_sets {'ncbi_16s_18s': {'reference': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ncbi_targeted_loci_16s_18s.fna', 'database': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ncbi_targeted_loci_kraken2.tar.gz', 'ref2taxid': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s/ref2taxid.targloci.tsv', 'taxonomy': 'https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump_archive/new_taxdump_2024-09-01.zip'}, 'ncbi_16s_18s_28s_ITS': {'reference': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ncbi_16s_18s_28s_ITS.fna', 'database': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ncbi_16s_18s_28s_ITS_kraken2.tar.gz', 'ref2taxid': 'https://ont-exd-int-s3-euwst1-epi2me-labs.s3.amazonaws.com/wf-metagenomics/ncbi_16s_18s_28s_ITS/ref2taxid.ncbi_16s_18s_28s_ITS.tsv', 'taxonomy': 'https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump_archive/new_taxdump_2024-09-01.zip'}, 'SILVA_138_1': {'database': None}}
abundance_threshold 0
n_taxa_barplot 12
amr False
amr_db resfinder
amr_minid 80
amr_mincov 80
analyse_unclassified False